Thalassiosira pseudonana: THAPSDRAFT_268266
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Entry
THAPSDRAFT_268266 CDS
T01078
Name
(RefSeq) predicted protein
KO
K00654
serine palmitoyltransferase [EC:
2.3.1.50
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00600
Sphingolipid metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09103 Lipid metabolism
00600 Sphingolipid metabolism
THAPSDRAFT_268266
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tps01007
]
THAPSDRAFT_268266
Enzymes [BR:
tps01000
]
2. Transferases
2.3 Acyltransferases
2.3.1 Transferring groups other than aminoacyl groups
2.3.1.50 serine C-palmitoyltransferase
THAPSDRAFT_268266
Amino acid related enzymes [BR:
tps01007
]
Aminotransferase (transaminase)
Class II
THAPSDRAFT_268266
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_1_2
Beta_elim_lyase
OKR_DC_1
Aminotran_5
DegT_DnrJ_EryC1
Cys_Met_Meta_PP
Motif
Other DBs
NCBI-GeneID:
7450355
NCBI-ProteinID:
XP_002287833
JGI:
268266
UniProt:
B8BUF0
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Position
2:complement(1054993..1057836)
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AA seq
622 aa
AA seq
DB search
MENTKSDNSNDAPYGNLVHQVANNADSPSNQHSSSDSVPTVLSASPHSSAPSSPKGSVVD
GSSGDETNNNNGSNTSPLSMSDTLGGVPSSVHRDNDPYADVRERMEELSMRDKMMHVHHD
KSSSGVSSSSAVTKGTGATNPHQDITIFAAITTYLGYIVLIITGHIRDISVANTGNYPSD
DLTKYAPLLKSWENFYTRRLYHRIQDCFNRPIASRPSAIISVLERVSFDGNKTMSETSDG
RVVRRCLNLGSYNYLGFADDWDITCRKGVMGSLDVLPSSVGSSRLEFGTTKLHREVEEIV
ATFTGKEDAVVLNMGFNTNATIIPTLTTRGDLIVSDELNHTSIVNGARASGAAIRTFRHN
DSSDLEGILREAIVYGQPRTRRPWNRILVIVEGIYSMEGEYCDLRNVVSVCKKYGAYVYL
DEAHSIGAMGPTGRGCCEYTGVDPSEVDVLMGTFTKSFGGMGGYIAADKRVVDMLRKECA
GSAYHNSLSPVVCQQIISSFKVIMGEDGTNIGKQKLNALRDNSNYFRMRLTDMGLHVLGN
YDSPIMPVMLYNPTKIAAFSRECLKRGLAVVVVGFPAVPILMSRARFCISAGHTREELDR
ALKELDEITDLLKLRYARSTFG
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atggagaacacaaaaagtgacaacagcaatgatgcaccgtacggcaatcttgtgcaccag
gttgccaacaacgctgactctccaagcaatcaacattccagcagcgattcagttcccaca
gtgctctcagcttcgcctcattcatctgccccttcttctccaaagggaagcgtggtagac
ggcagtagtggtgacgaaacaaacaacaacaacggcagcaacacgtcacctctctccatg
tcagacaccttgggaggggttccatcatccgtacatcgtgacaatgatccatacgcagat
gtacgtgaacggatggaggaattgagcatgcgcgataaaatgatgcacgtacatcatgac
aaatcatcgtcaggggtgtcttcttcatcggcagtaacgaaaggaacaggggcgaccaat
cctcatcaagatatcaccatatttgcagcaattaccacctatctcggatacattgtcctc
attatcacggggcacattcgcgacatttctgttgccaatacggggaactatccctcggac
gaccttacaaaatacgctcccctcttgaaatcgtgggagaacttttacacacgtcggctt
taccatcgtatccaagattgtttcaataggcctattgcatcgagaccatctgccatcatt
tcggtgttggaaagagtttcatttgatgggaacaagaccatgtcggagacatcggacgga
agggtggtacggaggtgtcttaatcttggatcatacaactatcttggttttgctgatgat
tgggacatcacgtgtcgcaagggggtgatgggaagtttagacgttcttccctcttccgta
ggatccagtcgtttggagtttggtaccacgaaactccatcgtgaggtagaggagattgtt
gcaacctttactggcaaagaagatgctgttgtgttgaacatgggtttcaacaccaatgct
acaattatcccaactcttacaacccgaggtgacctaattgtgagtgatgaattgaaccac
accagtattgtgaatggagctcgtgcatcgggtgcggccattcgtacgttccgtcacaac
gattcgtctgatttggaggggattctccgggaggcaattgtgtatggtcaaccacgcacg
aggagaccttggaaccgcatcttggtgattgtggaaggcatctattcaatggagggagag
tattgtgacttgagaaatgtggtttccgtgtgcaaaaagtatggtgcttatgtctacctt
gacgaagcccattctattggtgcaatggggccaactggacgaggatgttgtgaatacact
ggtgtcgatcccagtgaagttgatgtgttgatgggaacgtttaccaagagtttcgggggg
atgggaggatacattgctgctgataagagggtggttgatatgctgcgaaaggaatgtgct
ggaagtgcatatcacaattctctcagtccggtggtttgtcagcaaatcattagcagtttc
aaggttattatgggtgaagacggaacaaacattgggaagcaaaaactcaatgcattgcga
gacaactccaactacttcagaatgcgtctaacagacatgggattgcatgtcttgggtaac
tacgatagtcccatcatgcccgtcatgctctacaacccaacaaaaatcgcagccttttca
cgagagtgtctgaaacgaggtcttgctgtcgttgttgttgggtttcctgctgttccaatc
ctcatgtcgcgagcacgattctgtatctctgcgggtcatacacgagaggagttggatagg
gcactgaaagagctggacgaaattacagacttgctcaagttgaggtacgcgaggtcaacg
tttggttag
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