Thalassiosira pseudonana: THAPSDRAFT_268488 Help Entry THAPSDRAFT_268488 CDS       T01078                                  Name (RefSeq) predicted protein   KO K00801   farnesyl-diphosphate farnesyltransferase [EC:2.5.1.21] Organism tps  Thalassiosira pseudonana Pathway tps00100   Steroid biosynthesis tps01100   Metabolic pathways tps01110   Biosynthesis of secondary metabolites Brite KEGG Orthology (KO) [BR:tps00001]  09100 Metabolism   09103 Lipid metabolism    00100 Steroid biosynthesis     THAPSDRAFT_268488  09180 Brite Hierarchies   09181 Protein families: metabolism    01006 Prenyltransferases [BR:tps01006]     THAPSDRAFT_268488 Enzymes [BR:tps01000]  2. Transferases   2.5  Transferring alkyl or aryl groups, other than methyl groups    2.5.1  Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)     2.5.1.21  squalene synthase      THAPSDRAFT_268488 Prenyltransferases [BR:tps01006]  Terpene biosynthesis   Squalene/phytoene synthase    THAPSDRAFT_268488 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  SQS_PSY Motif Other DBs NCBI-GeneID:  7448777 NCBI-ProteinID:  XP_002288355 JGI:  268488 UniProt:  B8BXY6 LinkDB All DBs Position 3:1104367..1105823 Genome browser AA seq 442 aa AA seqDB search METNDFCDYVNIHRFDPPSEHMGGGGDAGPMFDGAAVVGDASKKQGAYGKVKTHKESTLK QLVHLDEVCSAITLLYLQPLKSNLESDVIKQTFDPSDLAFCDEILCKVSRSFAAVIRQLP PTLLMDVLIFYLVLRALDTIEDDMTFFDSNEDKVKILQSFHKTALVDPNWKMMGCGEGDE RRLLEEFPKCHSVYAALPEGSRRVISDITQRMATGMAEFVDKDLGQGTVDVQQYNRYCHF VAGLVGEGLSRLFSVSGLEQPSLATELHLSDQMGLFLQKTNIIRDYLEDYVDGRAFWPQS VWKKYSSSGDLGYFANPTTEEATNAGLYCLNELVTDALELVPDCLTYLSKLRCAEVFRFC AIPQVMAIATLEKCFNNGDVFTGVVKIRKGMSCMLINNTTDVLGVHGIFNKFATKVIRKA ETARKSGFEDPSYDRTIKACQV NT seq 1326 nt NT seq  +upstreamnt  +downstreamnt atggagacaaatgacttttgcgattatgtgaacattcatagattcgatcctcccagtgag cacatgggcggtgggggagatgccggaccgatgttcgatggtgctgcggtggtgggagac gcctccaaaaagcaaggagcttacggcaaagtcaaaacccacaaagaatccacactgaaa caactcgttcatcttgatgaagtctgctcggcaatcacacttctctaccttcaacctttg aaatccaaccttgagagtgatgttatcaaacaaacatttgatccttctgatttggcattt tgtgatgagatcttgtgcaaagtctcgcgttcctttgcagccgttattcgtcagcttcca cctacgttgttgatggacgtgctcatcttctatctggtgcttcgtgcactggatactatt gaagatgacatgaccttctttgactcaaacgaggataaggtgaagattctgcaatccttt cacaaaactgcattggtcgatcctaattggaaaatgatggggtgtggagaaggagatgaa cgtcgtctcttggaggagtttcccaaatgccattccgtttatgctgcacttcctgagggc agtcgtcgcgtcattagtgatatcacccagcgtatggctactggtatggctgagtttgtg gataaggatcttgggcagggaactgtagatgttcagcagtacaaccgttactgtcacttt gtcgccgggttggttggtgaaggtctcagtcgcctcttttcggtatcaggtttggaacaa ccttcgcttgcaacggagttgcatttgagtgatcagatgggtttgtttttgcaaaagacg aacattattcgcgattacttggaggattatgttgacggaagggctttttggccacagagt gtttggaagaagtacagttccagtggagacttgggatactttgccaaccctacaaccgag gaagctaccaatgctggattgtactgtttgaatgagctagtgacggatgcattagagctg gtgccagactgcttgacgtatctgtccaaactacgatgtgcggaagtcttccgtttctgc gccatccctcaggtaatggcgattgctacgttggagaagtgtttcaacaatggagatgta ttcaccggtgtggtaaagattcgcaagggaatgtcgtgtatgctcatcaacaatacaacg gacgtcttgggggtgcacggtatctttaacaaatttgcaaccaaagtaattaggaaggcc gaaacagcacgaaagagtggttttgaagatccttcttacgatcgtaccatcaaagcttgc caggtg

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