Thalassiosira pseudonana: THAPSDRAFT_268625
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Entry
THAPSDRAFT_268625 CDS
T01078
Name
(RefSeq) v-snare protein, Vti1 C-terminal half-like protein
KO
K08493
vesicle transport through interaction with t-SNAREs 1
Organism
tps
Thalassiosira pseudonana
Pathway
tps04130
SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
THAPSDRAFT_268625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_268625
Membrane trafficking [BR:
tps04131
]
SNARE
SNAP-25[N] (Qb)
Vti1
THAPSDRAFT_268625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
V-SNARE_C
Sec20
KH_9
Synaptobrevin
SNARE
DUF6049
Motif
Other DBs
NCBI-GeneID:
7442084
NCBI-ProteinID:
XP_002289645
JGI:
268625
UniProt:
B8C157
LinkDB
All DBs
Position
4:complement(392588..393424)
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AA seq
116 aa
AA seq
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MRGLAEIEGDPFKAEEAKRKLEREIGPHLLRETQALCAESEQIGASTLEQMGRQREQLER
TSGFIQQSLENTEQARQILKEMAYRALKNKIFLYCVIGVLVLANGGVLIHLWKRKT
NT seq
351 nt
NT seq
+upstream
nt +downstream
nt
atgcgaggccttgccgagatagaaggcgatccgttcaaggcagaggaggcaaaacgaaag
ttggaaagggaaattggtcctcatttgttgagagaaacacaagctctatgtgcagaatca
gagcagattggagcatcaacacttgaacaaatgggacggcaacgcgaacaactcgagaga
acatctggattcattcaacaatcactggagaacactgaacaagctagacaaatcttgaaa
gagatggcgtatcgggcgcttaagaacaagatttttctctattgtgtgattggggtgcta
gtgttggcgaacgggggagtgctgattcatttgtggaagcgaaagacatag
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