Thalassiosira pseudonana: THAPSDRAFT_268655
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Entry
THAPSDRAFT_268655 CDS
T01078
Name
(RefSeq) histone deacetylase 1 HDAC Hda1p
Organism
tps
Thalassiosira pseudonana
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hist_deacetyl
Ank
Ank_2
Ank_5
Ank_4
Ank_3
Motif
Other DBs
NCBI-GeneID:
7452641
NCBI-ProteinID:
XP_002289714
JGI:
268655
UniProt:
B8C1J3
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Position
4:complement(740723..743587)
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AA seq
637 aa
AA seq
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MKVDAPANEALPTDSSKLVDGDVVMLDESNASGDSLVKHVSPEVSHASQTPANGTDAFNC
PFDLDQRDDDENTPLHIAIHARKIEHVSLLLEAGASVHKKCDGSAPIHLAISIGAITAHV
NFAKKCVELLSRHGADLTLRDDSFHTPLYLACVANLCSVVEMLLNDPGSKDTLNLRSDRV
GGRPLHAAARCDVMRKGVPKGGERSTTELLLAAEGVDIDAQNNYGRTPLHIAASRGNWYV
ARLLINAGADVHLLDKRGFTPGQVAKKRGMVVPPDLMVLGEDSPMADVLKVHEYTYIEKT
SQLCASIPDHPNAIQTLDADTTVSRWSFEAALRAAGSVCEAVDKVMSGDFRNAFCAVRPP
GHHAGPRGIVTCPNDPDGSHGFCLLNNVAIGAAYARSMYRNDGIKKVAIIDFDVHHGNGT
EDIVRQITPIVFFASTHGYGPRDREIPAGADDTYNHGLQRLELRDSYRKNVIPALLDFNP
DMIFISAGFDAHRKDTMNFGYVGMIEEDYEWLTEQLVKVANTCCNGRVVSVLEGGDEGEW
ESQFERHMNEEKEKRRQMKMDRHARATDALRQSLLMGARHQPHVADHEEASHLDEESHNN
DIGMVTGEEEPSRKRRRNQVDYKQLYEKMKQEEGGGI
NT seq
1914 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttgatgcccctgccaacgaagcacttcctactgattcctccaagcttgtcgac
ggagacgttgtcatgttggatgaatcaaatgcttcgggtgattctctagtcaagcacgtc
agccccgaggtctctcatgcttctcaaacacctgctaatggtacagacgcgttcaactgt
cccttcgaccttgatcaacgtgacgacgacgaaaacactccattgcacattgccatccat
gctaggaagattgaacacgtaagtctcttactcgaggcaggggcatcagtccacaaaaag
tgtgatggaagtgctcccattcaccttgcgatcagtattggagccatcactgctcatgtc
aactttgccaagaagtgcgtcgagctcctcagtagacatggagccgatttgacattgaga
gatgactcctttcataccccgttgtacttggcatgtgtagccaacttatgctctgtggtg
gaaatgctattgaatgaccctggttcgaaagatacacttaatctcagatccgatcgagtt
gggggaaggcctctccacgcagctgcaaggtgtgatgtcatgaggaagggggtacccaag
gggggggaacggagtaccacggagctattgctggcagcggagggagttgacattgatgct
caaaacaactacgggcggactccacttcatattgctgcgtctcgtgggaattggtatgtg
gccaggttgttgatcaatgctggggcggatgttcatcttcttgataaacgagggtttact
ccaggtcaagtggcgaaaaagagaggaatggtagtgccaccggatttaatggtgttgggg
gaagattcacccatggccgatgtgttgaaggttcatgagtacacctatattgaaaagacg
agtcagttgtgtgcttccattccggatcatccaaatgctatccaaacgcttgatgcagac
accactgtgtcacgttggagttttgaagccgctttgagagctgcggggagtgtttgcgag
gcggtggataaggtcatgtcgggtgattttagaaatgctttttgtgctgttcgccctcct
gggcatcacgctggtcctagaggtattgtcacctgtcctaatgatccggatggctcgcat
ggtttctgcctcttgaacaatgtcgccattggagctgcttatgcacgaagtatgtaccga
aacgatggtattaagaaggtggcaatcattgactttgatgtccatcatgggaacggaacg
gaggatatcgttcgtcaaatcactcccattgtcttctttgccagtacacatggatacggt
ccgagggatagagagattccggcaggagctgatgacacttacaatcatggcttgcagagg
ttggagttgagggactcgtatcgcaagaatgttatcccggctcttttggacttcaatcca
gatatgatcttcatcagtgcaggattcgatgctcacagaaaagatacaatgaactttgga
tacgtaggcatgattgaggaggattatgagtggttgacggaacagctagtgaaggttgct
aacacgtgctgcaacggcagagtggtatctgtcttggaagggggagacgaaggggaatgg
gagagtcagtttgagagacatatgaacgaggagaaggagaagaggaggcagatgaagatg
gatcgacatgctcgtgcaaccgacgccttgaggcaaagtcttctaatgggagcacgtcat
caaccacacgttgcagatcacgaagaggcatctcatcttgacgaggagtcacacaacaat
gatatcggcatggtaacaggggaggaggaaccttctaggaagagacgcaggaatcaagtg
gactacaagcaattgtacgagaagatgaaacaggaggaaggagggggtatttaa
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