KEGG   Thalassiosira pseudonana: THAPSDRAFT_268689
Entry
THAPSDRAFT_268689 CDS       T01078                                 
Name
(RefSeq) potential RNA bindin g protein
  KO
K14787  multiple RNA-binding domain-containing protein 1
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:tps03009]
    THAPSDRAFT_268689
Ribosome biogenesis [BR:tps03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    THAPSDRAFT_268689
SSDB
Motif
Pfam: RRM_1 RRM_11 RRM_7 DUF8400 RRM_5 RBD_AKAP-17A RRM_PARP14_3
Other DBs
NCBI-GeneID: 7447954
NCBI-ProteinID: XP_002289789
JGI: 268689
UniProt: B8BZC4
LinkDB
Position
4:complement(1080209..1083123)
AA seq 886 aa
MTTPASTSTPTTTTRVCIKNLPLSFDEGKLKAHLQSSIASLILTDCKLLKTKDGRSRKIA
FVGFKSPEMAQQTVSYFHKSFALTSKLNVSLAFSKKEGPPLTSEYRPWSKHSAGSSRNQK
LQEQQQQQTDEATNSKTQKDTEVDGDELTSTKESDQVRRKREEFLSAMGVSDKHGKDSAV
GKSKFWANDDVVADPIDMIDGSNDAKDESDGSDEDNGNISSSSESDLDAQMMKTSATNEK
NSEGKEVSSDLDFLKSKQVKADILTDEDEDHEVDDEDDGTDSSSSSDSDSSSGENSSEEE
NEVQQEESSAADKGEEKDQANKDQPSITLADRLFVRNLPFTTTEEELFETFSQFGSVAAV
HIPVDDTKRNKGYAFISYQSKHDAKLAIDTMDGEDFQGRLIHILPARPSNEPDADGNNAN
LTYKERQALARQKEAENATQSWSASFLRGDTVVDNISDRLGVSKGDVLNVKDGISSGNAA
VRLALGETHIIAENIAFFEMHGVDVRALESKKSNSSSDKGGGGSASKRSATTILVKNLPY
DTSLEELTKAFHSIGGDAPRRILLPPSKTAALVEYDHATDARRAFRRLAYKKFKHVPLYL
EWAPMMDAVKKKDEAVENGTSDNVQMECNNDHNTVKKDLMDADDHNADADNTQTIYVKNL
NFNTSEDELKRQFTSVGFVPRAVKIPTKAAPMKKQSPADDSETKLVSMGYGFVEFVSEEE
AKKAMKSLQGKLVDGHSLDIKLSNKSLSSSKSSAPTIDKASKNTKIMIRNIPFEATRSEI
LQLFGTFGQLKKVRLPKKFDGTHRGFGFCEFLTRKEAQNAMATLSRTHLYGRHLVLEWAS
NEETVDGKVDVGMVREKAKRNATRGGLGGAGAADAKKVKRQHKKFD
NT seq 2661 nt   +upstreamnt  +downstreamnt
atgacgacccccgcatctacatcaacgccaaccacgacgacgcgagtatgcatcaagaac
ctaccgctctccttcgacgaaggcaaacttaaggcacatctacaatctagcatcgcttcg
ttgatactgactgattgcaagttattgaagactaaggatggaagaagtcgtaagattgcc
tttgttggcttcaagagcccggagatggcccagcaaaccgtgtcgtattttcataaaagc
tttgcactaacttccaagttgaatgttagtttggcgttttccaaaaaagaagggcctccg
ctaacatctgagtatcgcccttggtcaaagcacagcgcaggatcgtcgaggaatcaaaag
ctgcaagagcaacaacaacagcagacagatgaagctaccaacagtaagacgcagaaagat
acagaagtagatggcgatgagctgacaagtactaaagagtcagatcaagtacgtcggaaa
agagaggagtttctctcggccatgggagtatcagacaagcatggcaaagatagtgctgta
ggcaagtccaagttttgggcaaacgacgacgtagttgctgatcctatagacatgattgat
ggatctaatgatgcaaaagatgaaagtgatggcagtgatgaagataatggcaatatcagc
agcagttcagaatcagaccttgatgctcaaatgatgaaaacaagcgcaaccaacgaaaag
aacagcgaggggaaggaagtctcatccgatttggactttctcaagtctaagcaagtgaaa
gctgatattctcactgatgaggatgaagatcacgaagtggacgatgaagatgacggtact
gatagttcttcaagtagtgattctgatagcagtagcggggagaatagttcagaagaagag
aacgaagtgcagcaagaagaatcatctgcggcagacaaaggagaagaaaaagatcaagcg
aacaaggaccaacccagcatcacgttggctgatcgtctcttcgtacgcaatcttccattc
acaactacggaggaagaattattcgaaactttctcccaattcggctctgttgccgccgtg
cacattccagttgacgacaccaaacgaaacaaaggatatgccttcatctcttaccaatcc
aaacatgatgccaaacttgccatagatacgatggacggagaagatttccagggaagattg
attcacatcctacctgctagaccttcaaatgagccggatgctgatggaaataatgccaat
ctcacctacaaggaacgtcaagcactagctcgtcagaaagaggcggaaaatgccacgcaa
agttggtctgcaagtttccttcgtggagatacagttgttgacaatatctctgatcgtttg
ggagtatcgaagggcgatgtgctgaacgtcaaggatggtatttcttcaggaaatgcagca
gtgcgattggcattaggagagacgcatatcattgctgagaatattgcattctttgagatg
catggtgttgatgtgagggctttggaatctaagaaaagcaacagtagttcggacaaggga
ggaggtggcagtgcatccaaacgtagcgctaccacgattttggtcaagaatcttccttat
gacacgtcgttggaggagttgacaaaagcgtttcactctattggtggtgatgcacctcga
aggatcttgcttcctccttcgaagactgcggctcttgttgagtacgaccatgcaaccgat
gctcgtcgtgcgtttcgcagattggcttacaagaagtttaaacatgtacctctttatctt
gagtgggcgccaatgatggatgctgtaaagaagaaagatgaagcagtggagaatggtaca
tctgacaacgtgcagatggaatgcaacaatgaccacaacacagtaaaaaaagatttgatg
gatgcagatgatcacaatgcagatgccgacaacacgcaaacgatctacgtgaagaacctg
aactttaacacttccgaggatgagctgaaaagacaattcacttcagttggttttgttcct
cgtgcagtcaagatccctaccaaagctgcaccaatgaagaaacagagccccgcagacgat
agtgaaacgaagcttgtatccatgggctacggattcgtggagtttgtgtcggaggaggaa
gcaaagaaggcaatgaaatctcttcagggaaaacttgtggatggccattcgctggatatc
aagctctccaacaagagtctatcgtcgtcaaagagttctgctccgactatagacaaggct
tccaaaaataccaaaattatgatacgcaacatccccttcgaagcaactcgttcagagata
ctccaattgttcggaacgtttggtcagctgaagaaagtacgtcttccaaagaagtttgat
ggcactcatcgtggatttggtttctgcgaattcttgacgagaaaagaagcccaaaatgcc
atggcaacgttatcaagaacgcacttatacggtaggcatctagtattagagtgggcaagc
aacgaggaaactgtagacggaaaggtggacgttggaatggtgagagagaaggcaaagcga
aatgcaacgagaggtggattgggaggggcaggtgctgctgacgcgaagaaggtcaagcgt
cagcacaaaaagtttgattag

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