KEGG   Thalassiosira pseudonana: THAPSDRAFT_268807
Entry
THAPSDRAFT_268807 CDS       T01078                                 
Symbol
RIR1_2
Name
(RefSeq) ribonucleoside reductase
  KO
K10807  ribonucleoside-diphosphate reductase subunit M1 [EC:1.17.4.1]
Organism
tps  Thalassiosira pseudonana
Pathway
tps00230  Purine metabolism
tps00240  Pyrimidine metabolism
tps00480  Glutathione metabolism
tps01100  Metabolic pathways
tps01232  Nucleotide metabolism
Module
tps_M00053  Deoxyribonucleotide biosynthesis, ADP/GDP/CDP/UDP => dATP/dGTP/dCTP/dUTP
tps_M00938  Pyrimidine deoxyribonucleotide biosynthesis, UDP => dTTP
Brite
KEGG Orthology (KO) [BR:tps00001]
 09100 Metabolism
  09104 Nucleotide metabolism
   00230 Purine metabolism
    THAPSDRAFT_268807 (RIR1_2)
   00240 Pyrimidine metabolism
    THAPSDRAFT_268807 (RIR1_2)
  09106 Metabolism of other amino acids
   00480 Glutathione metabolism
    THAPSDRAFT_268807 (RIR1_2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_268807 (RIR1_2)
Enzymes [BR:tps01000]
 1. Oxidoreductases
  1.17  Acting on CH or CH2 groups
   1.17.4  With a disulfide as acceptor
    1.17.4.1  ribonucleoside-diphosphate reductase
     THAPSDRAFT_268807 (RIR1_2)
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   Modulation of nucleotide pools
    THAPSDRAFT_268807 (RIR1_2)
SSDB
Motif
Pfam: Ribonuc_red_lgC Ribonuc_red_lgN ATP-cone DUF1633
Other DBs
NCBI-GeneID: 7447236
NCBI-ProteinID: XP_002290484
JGI: 268807
UniProt: B8C1L6
LinkDB
Position
5:complement(57563..60885)
AA seq 811 aa
MYVTKKDGRLELLDKNKILQRLQSLSTNLSTPYLSLPTLATSILHGTYPNLPTREIDTLA
SETAASMSTQHPDYGRLAARICASANHKSTPDSFSKAMLLLNEEGGGFVNNEIADLVKRR
GKEIDDRIKHERDFEMTYFGYKTLERSYLLKLNEDTIVERIQYLWMRVALGIHCYANLQA
AFETYDLMSRGYFTHASPTLFHAGTTHPQLSSCFLVQMSDDSINGIYDTLKRCAVISKAA
GGIGLCVHKIRARGTFIKGTRGVSNGLVPMLRVFDVTSHYVDQGGGKRPGAFAIYLEPWH
ADIFDVLNLKKNHGKEEQRARNLFYGLWVPDLFMKRVEEDGVWSLMCPHRCPGLSECHGE
KFEELYAKYESDGRYTRQVRARELWAAILEAQIETGTPYLLYKDAANKKSNQQNLGTIQC
SNLCTEIIQYTNEEEVAVCNLASICLPKFVVSDRGNFGSTEGSGAYFDHEQLHKVAKIVT
KNLDKVIDVNQYPIEGAKKSNRSHRPVGIGVSGLADTFLRLGLPFASEEAKTLNEAIFET
IYHASLEASNEIAREKGSYETFAGSPASEGKLQFNLWGVDDVETPSHRKDQSALAFQKYS
TQVNGGGYDWETLRQNIIEGGLRNSLLVAPMPTASTSQILGVNECFEPFASNLYVRRVKA
GEFIIVNPHLIQDLTDLGLWNQSVRNQLMRDGGSVAKIECVPDRLKGLYKTVWEMKMKDV
IDMAADRGKFIDQSQSLNLFIADPTVDKLTAMHFYAWKKGLKTGIYYLRTRPAVNAIQYT
VEKDALPEVDASPQQNIPTLDDSETCLSCSA
NT seq 2436 nt   +upstreamnt  +downstreamnt
atgtatgtcaccaagaaggacggacggttggaactgctggataagaacaagattctacaa
agactccaatccctctccaccaacctctccaccccctacctctccctcccaactcttgcc
acctccatcctccacggaacctatcccaacttgcccacccgcgaaatcgacaccctcgcc
tccgaaactgccgcgagcatgtctacacaacatccagactacggacgattggccgctcgt
atttgtgccagtgccaatcacaagtcgactcctgattctttttcaaaagcaatgttgttg
ctgaatgaggagggaggtggttttgtgaacaatgagattgctgatttggttaagagacga
ggaaaggagattgatgatcgtattaagcatgagcgtgatttcgaaatgacgtactttgga
tacaagacattggagaggagttatttgttgaagttgaacgaggatacgattgtggaacgg
attcagtacttgtggatgagggttgcgttggggattcactgctatgccaatctacaagca
gcttttgagacgtatgatttgatgagtagagggtactttactcatgcgagtcctactttg
tttcatgctggtacgacgcatcctcagttgagtagttgtttcttggtgcagatgagtgat
gattccattaatgggatttatgatacgttgaagcgttgtgctgtgatttccaaggctgct
gggggtatcggtctctgtgtacacaagatacgagctagggggacgttcatcaaaggtacc
cggggcgtatccaatggactcgtaccaatgcttcgtgtatttgatgttacatctcactac
gttgatcagggaggagggaaacgaccaggagcatttgccatttacttggagccatggcat
gctgatatctttgacgtactcaatcttaagaagaatcatggaaaagaggagcaacgagca
cgaaacttgttctacgggctatgggtgccagatctgtttatgaaacgggttgaggaagat
ggcgtttggagtttaatgtgcccccatcgctgccctggtctttccgagtgtcacggggag
aagtttgaagaactgtatgcaaagtatgaatcggatggaagatacacacgacaagtgagg
gctcgtgaactgtgggcagcgatcttggaagctcagattgaaactggaactccgtatctt
ttgtacaaagatgcagcgaataagaaaagcaatcagcagaatctgggaacaattcaatgt
agcaacttgtgcacggagattatccaatacaccaatgaagaggaagttgctgtttgcaat
cttgccagtatctgccttcccaagttcgttgtcagcgatagaggtaattttggatcaact
gaaggttcgggtgcctacttcgaccacgagcaactacacaaagtggccaagattgtcaca
aagaatctggacaaggtcattgacgtcaatcagtatccaatagagggagcaaagaagtcc
aatcgcagccatcgtcccgttgggattggagtatcaggtttggcagatacattcttgaga
cttggtctgccttttgcttcagaagaggcaaagaccttgaatgaggctatctttgaaaca
atctaccatgcttctctggaggcgagtaacgagatcgcaagagaaaagggttcgtacgaa
acatttgctgggagtccagcgagtgaggggaagttacaattcaatctttggggcgttgac
gatgtcgagacgccaagtcaccgtaaagaccagtcggcgttggcatttcaaaagtactca
acccaagttaatggtggagggtatgattgggagacacttcggcagaacatcattgaagga
ggactgcgaaactctctgctggtagcacctatgccaactgcatctacatcgcaaatcctt
ggagtaaacgagtgctttgagccatttgcgtccaatctctatgtgcgacgagtcaaagct
ggcgagttcatcatagtcaatcctcacttgatacaagatctcacagatctcgggttgtgg
aaccaaagtgtgaggaatcaactgatgcgagatggaggttccgtggcgaagattgagtgt
gtgccagatcgactgaagggattgtacaagactgtttgggagatgaagatgaaggacgtc
attgacatggcagcggatagagggaagttcatcgaccaaagccaaagcctcaacctcttt
attgccgatccaacagtggacaaactgacagcaatgcacttctatgcatggaagaaggga
ctaaagacggggatatactatctcagaacgagaccggctgttaatgcaattcaatacaca
gtagaaaaggatgctttgccagaagtagatgcatcgccacagcaaaacatacctactctc
gatgacagcgaaacatgcctgagttgctcggcatag

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