Thalassiosira pseudonana: THAPSDRAFT_268976
Help
Entry
THAPSDRAFT_268976 CDS
T01078
Name
(RefSeq) presenilin
KO
K04505
presenilin 1 [EC:3.4.23.-]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tps01002
]
THAPSDRAFT_268976
Peptidases and inhibitors [BR:
tps01002
]
Aspartic peptidases
Family A22: presenilin family
THAPSDRAFT_268976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Presenilin
DUF4834
Motif
Other DBs
NCBI-GeneID:
7444925
NCBI-ProteinID:
XP_002290889
JGI:
268976
UniProt:
B8C3Y7
LinkDB
All DBs
Position
5:complement(2181612..2183416)
Genome browser
AA seq
369 aa
AA seq
DB search
MILSSLSVIYINTPSTKAAGEAALSSTYQVFTISDDQSKAASLGLSLVNGLVIVSVIGLM
TFLIVILYKFRCMKFLLGYMILATTVLLGFLGSQMFTVAINKYQLPIDKLSFYLTMYNFA
IVGTLAVFYQKGVPTIVNQGYLVANSTIVAWQLSYFNDWMAWALLIMLALYDLFAVLTPC
GPLKALVNLMSKEDAPAMPGLLYEAELPVNAVRPGRGRRRKWRHQRYSAKTKSRKKRQNT
QQSTTSSNNEDEMTQSDNQEQPVIQMMEEVPKECEDDEKGGNTIKLGLGDFIFYSVLVSK
AAENGFAAFVACFLSILTGLGGTLVLLAVYHHALPALPISIFLAVVFFVLTIYCMEPWIQ
DMWQVPYYF
NT seq
1110 nt
NT seq
+upstream
nt +downstream
nt
atgatcctctcctccctctccgtaatctacataaacaccccctccaccaaagccgccgga
gaagctgccctctcctccacgtatcaagtattcactatatcggatgatcagagcaaggcg
gccagtttgggattgagtttggtgaacggtttggtgattgtgagtgtgattgggttgatg
acctttttgattgtgattttgtacaagttcagatgcatgaagtttctcctagggtacatg
attctggccacaaccgtcctccttggcttcctcggctctcaaatgtttaccgtcgcaatc
aacaaatatcaactacccattgacaaactatcattctacctgacaatgtacaactttgcc
atcgtgggaacattggctgtgttttatcaaaagggagtgcccacaatagtgaatcaaggc
tatctcgttgctaattcaacaatcgttgcatggcagttatcctactttaacgattggatg
gcatgggcactcttgatcatgctggcattgtacgatctgttcgcagtgctaacgccttgt
ggaccgttaaaggcattggttaatttgatgagtaaggaggatgctcctgcgatgccgggg
ttgttgtatgaggctgagttgccggtgaatgcggtgaggccagggaggggaaggaggaga
aaatggaggcatcagagatattcagcaaagacgaagtcgcgaaagaaacggcaaaataca
caacaaagcacgacatcatctaacaatgaggacgaaatgacacaatccgacaatcaggag
caaccagtgatacaaatgatggaagaagtgccaaaagaatgcgaagacgatgaaaagggt
gggaatacaattaagcttggacttggagacttcatattctactcagtgcttgtatcaaaa
gcggctgaaaacggatttgcagccttcgttgcgtgctttctgtcaatattgactggactc
ggaggcacgttggtgttgctggctgtgtaccatcatgctttgccggcgttgccgatatcc
atctttcttgcggtagtcttctttgtgttgacgatttattgtatggagccttggatacaa
gacatgtggcaggttccatattacttttag
DBGET
integrated database retrieval system
