Thalassiosira pseudonana: THAPSDRAFT_269448
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Entry
THAPSDRAFT_269448 CDS
T01078
Name
(RefSeq) mate efflux protein, multi antimicrobial extrusion family
Organism
tps
Thalassiosira pseudonana
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Gene cluster
GFIT
Motif
Pfam:
MatE
Motif
Other DBs
NCBI-GeneID:
7450967
NCBI-ProteinID:
XP_002292516
JGI:
269448
UniProt:
B8C8I4
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Position
9:complement(871856..873424)
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AA seq
514 aa
AA seq
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MQQHNNGYDATTHDEQELLVDLEIEEGSNSSDASLSPNTSQQILNLAVPALISLAIDPLM
TIADTAFVGRYSPPNDPYPLAGLGSAAALLVFSFYVFNFLATATAPLVANRRAALDEKGA
REVGGQALSLALALGSILAVVLLIFRAPLLEVMGTGVTGAESYAEQFLVVRALAAPAVLI
CSASNGVLRGYLDTKTPTLVLLGSNVVNLMLDVVLVANMKMGPMGAGIATTVAEWIAALC
FLGVLGGKLPSADGDLGSNSRDDATIFPVLTLPKWQDVRPLVVASSSVFLRSIVLQIAMS
SAAAMAARTTVESGLTEAGASSSVAAHQIALQLWLLCSFLCDALATASQALVADGIGRGD
PKAVRGVSQTVFQWGLVLGLTLSACLWIGTSSGFLIDFFTSDEGTRIELGKLLTIVICAQ
PLNSFVFAADGVLQGAEEFTYQAKSMVVSVATAIGAFAAIEYTPFVAMLVGDNDTLVNVW
FGLIALQSMRALTSFVKLAEEDGPIDIFGKQIIG
NT seq
1545 nt
NT seq
+upstream
nt +downstream
nt
atgcaacaacataacaatggatacgatgcgacaacacacgatgaacaggaattactggtt
gatttggaaattgaagaagggtccaacagtagtgacgcctctctctcaccaaacacatct
cagcaaatcctcaaccttgccgtcccagctctcatctcactcgctattgatccactcatg
acaattgccgacactgcctttgttggccgatattctccaccaaacgatccatacccgctc
gctgggctgggttctgccgctgctctgttggtgtttagcttctacgtcttcaacttcttg
gccacagcgactgctccacttgtggcaaatagacgtgctgcacttgacgagaaaggtgca
cgagaggtgggcgggcaggctctgagtttggcattagctttggggagtatactggcggtt
gtactgctgatatttcgtgcccctttgttggaagttatgggcacaggagtcacgggagca
gagtcctatgctgaacaatttcttgtagttagggcattagctgcacctgcagtcttgatt
tgttcggcatccaatggagtactcaggggatatctggacacaaagacgcctactcttgtt
ttgttgggcagcaacgttgtcaatctgatgctggatgtggttttggtggcaaacatgaag
atggggcccatgggagctggaattgcgacaacagttgctgaatggattgctgcgttgtgt
tttctgggtgtattaggaggaaagttgccgagcgcagacggcgatcttggatccaacagc
agggatgacgcgacgatttttcctgtcttgacactaccaaagtggcaagatgtacgaccg
ttggtggtggcctcttcttccgtgtttctcagatcgattgtgttgcaaattgcaatgtct
tctgctgcagcaatggcagcaaggactacagtcgagagtggtctcaccgaagcaggtgct
tcctcgagtgttgcggcacatcaaattgcacttcagttgtggttactatgctcgttctta
tgtgatgcattagcaactgcaagtcaggctcttgtggctgacggtattggtagaggggac
ccaaaagctgtacgaggtgtgagccagacagtatttcaatggggattggtgttggggttg
actctttctgcatgtttatggattggcacatcgtcaggctttctgatagacttctttacc
tcagacgaaggcactcggatagagctcggaaagctccttacaatcgtcatatgtgcacaa
cctctcaattcgtttgtctttgctgcagatggagtgttacaaggggctgaagagtttaca
taccaagcaaagtcaatggttgtaagcgttgccaccgcgattggagcgttcgctgcgatt
gaatacactccgtttgttgctatgttagttggtgataatgacacgctggtcaacgtttgg
tttggtctcattgcactgcaatcaatgcgagccttgacttcttttgtaaagcttgcggaa
gaagacggtcctatcgacatctttggtaaacaaataataggttag
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