Thalassiosira pseudonana: THAPSDRAFT_269593
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Entry
THAPSDRAFT_269593 CDS
T01078
Symbol
RPT4
Name
(RefSeq) 26S proteasome ATPase regulatory subunit
KO
K03064
26S proteasome regulatory subunit T4
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_269593 (RPT4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_269593 (RPT4)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
ATPase subunits
THAPSDRAFT_269593 (RPT4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Prot_ATP_ID_OB_C
AAA_lid_3
AAA_16
nSTAND3
AAA_5
AAA_22
RuvB_N
PRS7_OB
AAA_2
AAA_lid_PRS2_C
DUF815
Prot_ATP_ID_OB_N
RNA_helicase
TIP49
Mg_chelatase
AAA_7
AAA_28
AAA_14
AAA_25
IstB_IS21
AAA_18
Parvo_NS1
AAA_24
bpMoxR
AAA_3
ATPase
Sigma54_activat
AAA_11
Sigma54_activ_2
NPHP3_N
AAA_33
NACHT
TsaE
eIF-1a
PhoH
ABC_tran
ResIII
Motif
Other DBs
NCBI-GeneID:
7448044
NCBI-ProteinID:
XP_002293113
JGI:
269593
UniProt:
B8C9V9
LinkDB
All DBs
Position
12:complement(710..8536)
Genome browser
AA seq
413 aa
AA seq
DB search
MQYSDTRRNLYPISDVAPAVSERDQVLEQYRAKIREHRETEARLKRMREDVKGLVARYQK
TEDDLTALQSVGQIIGDVLKRLDNDRFIVKASSGPRYVVGCRSRLNQDKLKPGTRVALDM
TTLTIMRILPREVDPTVFHMQSTEEEDEKGGKKVSYSDIGGLNEQIRELREVIELPLTNP
ELFIRVGIKAPKGVLLYGPPGTGKTLLARALASNISATFLKVVASAIVDKYIGESARIIR
EMFGFARDHQPCVIFMDEIDAIGGSRFSEGTSADREIQRTLMELLNQMDGFEDQGQVKMV
MATNRPDILDPALLRPGRLDRKIEIPEPNETQRLEILKIHSASITKRGDIDFESVVKLAD
GLNGADMRNICTEAGLFAIRSDRDYVLEEDFMKAARKVLDTKKLESKLDYSKV
NT seq
1242 nt
NT seq
+upstream
nt +downstream
nt
atgcaatacagcgatactcgacggaatctctatccgatatccgatgtcgctccagctgtc
tctgagagagatcaggtactcgagcagtaccgggccaagatccgagaacaccgcgaaacc
gaagcgcggctgaaacgcatgcgagaagacgtgaaaggcctcgtagcccgctaccaaaag
accgaagacgatctcaccgccctccaatccgttggccaaatcatcggcgacgtcctcaaa
cgcctcgacaacgatcgcttcatcgtcaaagcctccagcggcccacgctacgtcgtcggc
tgtcgctccaggttgaaccaagacaagctcaagcccggaacacgcgtggcactcgacatg
acgacgctgaccatcatgaggattctcccacgtgaggtggatccgaccgtgtttcatatg
cagagtacggaagaggaggacgagaagggggggaagaaggttagctatagtgatattggg
gggttgaatgagcagattagggagttgagggaggttattgagttgccgttgacgaatcca
gagttgtttattagggttgggattaaggcgcccaaaggagttctcctctacggacctccc
ggaacaggcaagacactcctcgcacgagccctagcctccaacatatctgccactttcctc
aaagtcgtagcctctgccatcgttgacaaatacattggtgaatcggcacgtatcattcgt
gaaatgtttggtttcgcacgtgatcaccaaccctgtgtcattttcatggatgaaattgac
gccattggcggttcgagattcagcgagggtacctctgctgatcgagagattcaacgtacc
ttaatggaactgctcaatcaaatggatggatttgaagaccaaggacaagtcaaaatggtc
atggcaaccaatcgccctgacatccttgatccagcccttctccgtcctggacgtttggac
agaaagattgaaatccccgaacctaacgaaacgcaacggttggaaatcctcaaaatccat
tcagcctccattaccaaacggggagatatcgactttgagagtgttgtcaaattagcggat
gggttgaatggtgcagacatgaggaacatttgtaccgaagctggactgtttgccattcgg
agtgatcgtgactatgtgttggaggaggactttatgaaggctgcgaggaaggttcttgat
acgaagaagttggagagcaagttggactacagcaaggtctaa
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