Thalassiosira pseudonana: THAPSDRAFT_269660
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Entry
THAPSDRAFT_269660 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K19753
dynein axonemal assembly factor 11
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
03037 Cilium and associated proteins [BR:
tps03037
]
THAPSDRAFT_269660
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_269660
Cilium and associated proteins [BR:
tps03037
]
Motile cilia and associated proteins
Dynein assembly factors
THAPSDRAFT_269660
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Dyneins
Dynein-related proteins
THAPSDRAFT_269660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CS_DNAAF11_C
LRR_8
LRR_9
LRR_4
SHQ1-like_CS
Motif
Other DBs
NCBI-GeneID:
7445711
NCBI-ProteinID:
XP_002293322
JGI:
269660
UniProt:
B8CB32
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All DBs
Position
13:209861..211546
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AA seq
457 aa
AA seq
DB search
MTTSTPTPSPTPILRSITLPLIRKRSEHNSGLVSNLEELALHQEELQSIGPVLGRTCGKT
LKILLLQNNVIERLEYNEMKFFRSLEYVNLALNNLTTLGDSGLSGMEWLKKLDVTLNFLD
VDCLRESVGELEGCGRLEEVFLIGNPCMGWSGCRPYIIARLPNLKFLDGKEIKRSERIAA
LQKLPELSMELDLLAEKRRAERRLQQQRSNNEGSSDCNTDEDEVDESYILQNETTHHNPT
TRTKLSNEMYDQKQAKEKQETSNAFDVDYTNELTKDGGIKQCNQGKHRFWFEDSSPSKSN
SSKDGGILTMKIAIPKYLSTSLVDVDIHPTYVSVVIKSKILRVILPVEVISDKAVARRSA
SSGYLELVMPKVDPDEKVIGLGFVRGGAKSASEKDSDGAERGANEAKKKAVEKKERIGLS
ILKEGGAIHSLNIVQDEAVACGGNIEDEEEDEPPPLF
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgacaacctccacgccaacaccatcaccaacgcccatcctacgatccatcaccctcccc
ctaatccgtaaacgatccgaacataactcaggcctagtatccaacctcgaagaactcgcc
ctccaccaagaagaactccaatccatcgggcctgtcctcggccgaacgtgcggcaaaaca
ctcaagattctactgctgcaaaacaatgtgattgaacgattggaatacaatgagatgaag
ttttttcgttcgttggagtatgttaatttggcattgaacaatttgaccactttgggggac
agtgggctgagtggtatggaatggttgaagaaattggatgtcacgttgaactttttggat
gtggattgtttgagagaaagcgtgggggagttggaggggtgcgggagattggaggaggtg
tttttgattggcaatccttgcatgggttggtcaggatgcagaccatacataattgcacgg
cttcccaatctcaagttccttgatggaaaggagatcaaacgttccgaacgaatagctgct
ttgcaaaagttgccagaattgagtatggagcttgatttgttggctgaaaagagaagagct
gaacgaagactacaacagcagcgtagcaacaacgagggcagcagcgattgcaacacagac
gaagacgaagtggatgaatcctacattctacagaacgaaacaactcaccacaatccgaca
acacgtaccaaactctccaatgaaatgtacgatcaaaagcaggccaaggagaagcaagag
acttcaaatgcattcgatgtagactataccaacgagctcacgaaagacggtggcatcaaa
caatgcaatcaaggcaaacatcgattctggttcgaagactcctctccttccaaatccaac
tcctccaaagatggaggcatactaacaatgaaaattgccattcccaaatatctatccacc
tcgctcgtcgatgtggacattcacccaacctacgtcagcgtggtcatcaaaagcaagata
ttgagggtcattttaccagtggaggtgatctccgataaagcagtggcacgaaggagtgca
agttcgggttatttggagttggttatgccaaaggttgatccggatgagaaagtcatcggg
ttgggatttgttcgtggtggagcgaagagtgcatcggagaaggattccgacggtgctgag
cggggagctaatgaagcaaagaagaaagcagtggagaagaaggaacgaattggactttca
atcttgaaggagggcggagcaattcactctttgaacatcgttcaagatgaagccgtggct
tgcggtggtaacattgaagacgaggaggaggatgaacctcctcctctgttttga
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