KEGG   Thalassiosira pseudonana: THAPSDRAFT_269780
Entry
THAPSDRAFT_269780 CDS       T01078                                 
Name
(RefSeq) hypothetical protein
  KO
K12829  splicing factor 3B subunit 2
Organism
tps  Thalassiosira pseudonana
Pathway
tps03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    THAPSDRAFT_269780
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:tps03041]
    THAPSDRAFT_269780
Spliceosome [BR:tps03041]
 Complex A
  U2 snRNP components
   U2 snRNP specific factors
    THAPSDRAFT_269780
 Complex B
    THAPSDRAFT_269780
 Complex C
   U2 SnRNP specific factors
    THAPSDRAFT_269780
SSDB
Motif
Pfam: DUF382 PSP Prion_octapep
Other DBs
NCBI-GeneID: 7452719
NCBI-ProteinID: XP_002293961
JGI: 269780
UniProt: B8CCL9
LinkDB
Position
14:complement(695817..697775)
AA seq 579 aa
MALSNAEKNKRKRDRKKREREAQKLAAEAVAVNAETATDDSQADVEIEYIAEPLFASAAV
ADSSTGAAAVGTASGAGKKDDDDAVAADGDALVPAAAAAGDNEDLQEVMRRFQDRAAVIY
VTDDETKLQSSTDNITSSSSANNNDPNSLLDDDEEESHLSKRKLKDLLRPTVAQLKQLVK
NPELVEAHDVTAPDPEFLIYLKGVEGTVPVPRHWGRKRKYLQGKRGVEKPPFALPDFIVK
TGICDVRSATAEDENKMSIKQKNRLRVSGRGGGVDVDYRTLYEAFFQHQTKPEKLTQFGD
LYYEGKEYETTKSTNFRPGYMSERLREALGMANEYSPPPWLINMQRYGPPPSYPNIKIAG
LNAPLPTGASYGYHVGGWGKPPVDTFGRPLYGGDPFGLAAGGMVTSDGKAISKRLWGALP
SAFGGDKDDDEDEESSEEESSDEEMEESSEEEEGELEAPTGEAAVSRAPGMDSVLPDGVD
SVVPSSAIDLRKPGDETPMVGDAPKQLYTILQQTTADKDSQQTSVFASDHAYVLPGAAPG
TGPEGMASVLSKAVGDGAKRKRAKDDDEDADELGKKFKF
NT seq 1740 nt   +upstreamnt  +downstreamnt
atggcgctctccaacgccgagaagaacaaacgcaaacgcgaccgcaagaaacgcgagcgc
gaggctcaaaagctcgctgccgaagcggtggcagtgaatgctgaaaccgccacagacgac
agccaggccgatgtggagattgagtacatcgcagagcctctgtttgcgtcggcggctgtt
gccgattcatcaaccggtgcagctgcagtagggaccgcctcgggagctggcaagaaggat
gatgacgatgctgttgccgccgatggagatgcactcgtaccagcagcagcagcagctgga
gataatgaagatctccaagaagtaatgcgtcgtttccaagatcgtgccgcagtaatctac
gtcacagacgatgaaaccaaacttcaatccagcaccgacaacatcacctcctcctcttcc
gccaacaataacgatccgaactccctcctcgatgacgatgaagaagaatcgcacctctcc
aaacgcaaactgaaagatctcctccgtcccaccgttgcacaactaaaacaacttgtgaag
aatcccgaattggtagaagctcatgatgtcactgcgccggatccagagtttttgatttat
ttgaagggtgtggaggggactgtgcctgttcctaggcactgggggaggaagaggaagtat
ttgcagggaaagagaggagtggaaaagccacccttcgccctcccagactttatagtcaaa
accggaatctgcgacgtccgctccgccaccgccgaagacgaaaacaaaatgtccattaaa
caaaagaaccgtctccgtgtctctggccgcggagggggcgtggacgtcgactaccgcacc
ctctacgaggcattcttccaacatcagacgaaaccggagaagttgactcagtttggtgat
ttgtattacgaggggaaggagtatgagactaccaagagtacgaattttagaccggggtat
atgagtgaacggttgagagaggcgttggggatggcgaatgagtatagtcctcctccgtgg
ttgattaatatgcagaggtatggaccccctccttcgtatccgaatattaagattgcgggg
ttgaatgcacctttgcctacgggggcaagttacgggtatcatgttggggggtgggggaag
cctcctgtggatacgtttggaaggccgctgtatgggggagatccgtttggtttggcggct
gggggtatggtgacgagtgatggaaaggcaattagcaaacgtctttggggagcgttgccc
agtgcatttggaggcgataaggacgatgatgaggacgaggaatcgtcagaggaagagtcc
agcgatgaagagatggaggaatctagcgaagaggaagaaggagagttggaagcacccact
ggagaagctgcggtgtcacgtgctccagggatggacagtgttcttcccgatggagttgac
agtgttgtaccatcatcagcgattgatcttcgtaagccaggagacgaaacacccatggtt
ggcgatgcaccgaaacaattgtatacgatacttcagcaaacgactgcagataaggattca
cagcaaacgagtgtatttgcgtcagatcatgcctatgtgttgcctggagctgcccctgga
actgggcctgagggaatggcaagtgtgttgtccaaggctgttggagatggagcgaaacgc
aagagggcgaaggatgacgacgaggatgctgatgagctgggtaaaaagttcaagttctaa

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