KEGG   Thalassiosira pseudonana: THAPSDRAFT_270065
Entry
THAPSDRAFT_270065 CDS       T01078                                 
Name
(RefSeq) WD40-repeat protein
  KO
K11462  polycomb protein EED
Organism
tps  Thalassiosira pseudonana
Pathway
tps03083  Polycomb repressive complex
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03083 Polycomb repressive complex
    THAPSDRAFT_270065
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_270065
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    PRC2.1
     THAPSDRAFT_270065
    PRC2.2
     THAPSDRAFT_270065
SSDB
Motif
Pfam: WD40 WD40_CDC20-Fz WD40_Prp19 WD40_WDHD1_1st Beta-prop_CAF1B_HIR1 EIF3I Beta-prop_TEP1_2nd Beta-prop_EML_2 WD40_MABP1-WDR62_2nd WDR55 Beta-prop_TEP1_C Beta-prop_WDR75_1st Beta-prop_SCAP WD40_RFWD3 ANAPC4_WD40 WD_LRWD1 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_IFT140_1st Beta-prop_IFT122_1st Beta-prop_WDR11_1st Beta-prop_RIG_1st
Other DBs
NCBI-GeneID: 7443681
NCBI-ProteinID: XP_002294990
JGI: 270065
UniProt: B8CFB4
LinkDB
Position
22:complement(187397..189169)
AA seq 485 aa
MRSDDDGDGHYDHDAPTTDGCGGIGDANSQRKGSDDVEDISYFATCSERYATIYEVINTS
PSSDDDDDNNNNNNKSPPSNGSPQSLSVRQVYEDEDEGEYFYAIAFGARGVGSPAGHSPL
DVHDSDINETDTNVVHIGGRAEQSTKKPNSSTLPSKRQKITSSNTLLLPCSSTQNGPPLL
CLAGIRGVIKIIDTVRRSLFLTLDGHNDAITDLQFCPTNEWLLLSSSNDESIRLWNVQTG
TNIAVFAGHCGHRGHVLSISWHCSGERFASAGMDNVVKLWNVTGEEDGNEKKEGIVEKAV
KDSWKLAPKCFSTVIQQFPYFSTTSVHSDYVDCVQFVGDLLLSKSVNNTVVLWKPLLNDE
GEARQHAESESSQHCTIPSSILFLREFALTHCSNWFVRFHSPPPYYKILALGNQKREVKL
WNIGGDDGCHPSQKPFCTLVTRGGGIGFGDSVKCSTVVRMVRFSHCGSSLVAVCDDSTIW
LWQTQ
NT seq 1458 nt   +upstreamnt  +downstreamnt
atgcgaagcgatgacgatggtgatggccattatgatcatgatgcaccgactactgatggt
tgtggcggtattggggatgccaattcacagaggaaagggtctgatgacgtagaagacatt
tcttactttgcaacttgttcggagaggtatgctaccatctacgaagttataaatacatca
ccaagcagtgacgatgatgatgacaacaacaacaacaacaacaaatcaccaccatccaac
ggcagtcctcagtccctatccgttcgtcaggtgtacgaagacgaagacgaaggagaatac
ttctatgcgattgctttcggggcaagaggggtcggaagtccagctgggcactcccctctc
gatgtgcatgacagcgacatcaacgaaaccgacactaacgtcgtacacatcggaggccgt
gctgaacaaagcacaaagaagccaaactcctctactctgccatcgaaacgacaaaagata
acttcatcaaacactctattgttaccatgctcttccactcaaaacggccctccactactg
tgtctagcggggattcgaggcgttatcaagatcatcgacacagtgcgtcgttcactcttc
ctaactctagatggacacaacgacgcgatcaccgatttgcaattctgtccaaccaatgaa
tggctactgctttcgtcatctaacgatgagtccatccgtctatggaacgtacaaacggga
accaatattgctgtgttcgctggacactgtgggcatcgaggacatgtgctgagtatatct
tggcattgcagtggtgaaaggtttgcaagtgccggaatggacaatgtggtgaagctgtgg
aatgtcactggagaggaggatggcaatgagaaaaaggagggaatagtggaaaaggcagtg
aaagatagttggaaattggcaccgaaatgcttctcgacagtcattcagcaattcccatac
ttttcaacaacttcagtgcattcagattatgtggattgcgtccagtttgtaggtgatttg
cttctttcaaagtcggttaacaacaccgtggtactgtggaaacctctactgaacgacgag
ggcgaagccagacaacacgcggagtcagaatcgtcacaacattgtacaattccttcgtct
attctgtttttacgggagtttgctttgactcattgttcaaattggtttgtacgcttccat
tcgcctcccccgtattacaagatactggcacttggcaatcaaaagcgcgaggtcaaactg
tggaatattggtggagatgatggatgccatcctagccaaaagccattctgcactttggtc
acaagaggaggaggtattggctttggagattcagtcaaatgtagcaccgtggtgaggatg
gttaggtttagccattgtggatcgtctttggttgcagtgtgcgatgattcaacgatttgg
ctgtggcagacacagtga

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