Thalassiosira pseudonana: THAPSDRAFT_270087
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Entry
THAPSDRAFT_270087 CDS
T01078
Name
(RefSeq) WD40-repeat protein
KO
K13137
serine-threonine kinase receptor-associated protein
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
tps03041
]
THAPSDRAFT_270087
Spliceosome [BR:
tps03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
THAPSDRAFT_270087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EIF3I
WD40
WD40_CDC20-Fz
WD40_Prp19
WD40_WDHD1_1st
Beta-prop_EML_2
WD40_MABP1-WDR62_2nd
Beta-prop_TEP1_2nd
Beta-prop_WDR90_POC16_2nd
WDR55
ANAPC4_WD40
Beta-prop_IFT122_1st
Beta-prop_CAF1B_HIR1
Beta-prop_WDR75_1st
Beta-prop_RIG_2nd
Beta-prop_SCAP
Beta-prop_EML
Beta-prop_IFT140_1st
WDR90_beta-prop_4th
WD40_RFWD3
Beta-prop_EIPR1
NBCH_WD40
Beta-prop_TEP1_C
Beta-prop_RIG_1st
Beta-prop_WDR19_1st
Beta-prop_WDR35_TULP_N
Beta-prop_DCAF12
RMC1_N
Beta-prop_NUP159_NUP214
WD40_like
Beta-prop_Vps41
Nucleoporin_N
PQQ_2
Motif
Other DBs
NCBI-GeneID:
7442840
NCBI-ProteinID:
XP_002295040
JGI:
270087
UniProt:
B8CFL5
LinkDB
All DBs
Position
22:complement(499231..500593)
Genome browser
AA seq
327 aa
AA seq
DB search
MAPPSEPTASTKGRQIPIVCPGHTRPLAELQFCSVNDNPNGDDEPRTFLVSACHDKCPMV
RDAESGDWIGTFKGHKGAVWSCRLDPAAFLGATASGDFSVKVWDAITGSPLHSFPHKHVV
KSCDWSPDSKRLATGGNEGILRVFDIVHPEKAPLEFVQSEKEVVSISKCNWIDNHTVLAA
CSDGSIRFWNVDASDPTQQLTRTLQVKDGVRDMELQALSSNNKTILTVAAGDKVTFFDMA
TGDMIHSYKMPIHFREEGGASLHPSGAKFIAGGSDLWVRVFDFESGEELECHKGHHGPVR
CLRYHPDGKSYATGSEDGTIRLWKTDP
NT seq
984 nt
NT seq
+upstream
nt +downstream
nt
atggcacccccctccgaaccaaccgcctccaccaaaggtcgtcaaatccccatagtctgc
ccaggccacacccgccctctcgccgaacttcaattctgttccgtcaacgacaatcccaac
ggggacgatgaaccgcgtacctttctcgtatcggcgtgtcatgacaagtgtcccatggtg
agggatgcagagagcggggattggattggaacgttcaaggggcataagggggcggtttgg
agttgtaggttggatcctgcggcttttttgggggctactgctagcggcgacttcagcgtc
aaagtatgggacgcaatcaccggctctcccctccactccttcccccacaaacacgttgtc
aaatcctgcgattggagtccagactccaaacggctcgccaccgggggaaacgaggggata
ttacgagtgtttgacatcgtgcatccggaaaaggcacctttggagttcgtccaaagtgag
aaggaagtggtttctatttcgaaatgtaactggattgataatcataccgttcttgctgct
tgttcggatggatccattcgcttctggaacgtggatgcttctgatccaactcaacaactc
acacgcaccctccaagtcaaagatggagttcgtgacatggaacttcaagctctatcgtcc
aacaacaaaacaatactcacagtagcggcaggggacaaggtgactttcttcgacatggcc
acgggtgatatgattcactcgtacaaaatgccaatccattttagagaagagggaggagca
tctctacaccccagtggagccaagtttatcgccggggggagtgatttgtgggtacgtgtg
tttgattttgagagtggagaggaattggaatgtcataaggggcatcatggaccggtgagg
tgtttaaggtatcatccggatgggaagagttatgctacggggtcggaggatgggactatt
cgtttgtggaagactgatccttag
DBGET
integrated database retrieval system