Thalassiosira pseudonana: THAPSDRAFT_2703
Help
Entry
THAPSDRAFT_2703 CDS
T01078
Name
(RefSeq) predicted protein
KO
K15175
parafibromin
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
tps03021
]
THAPSDRAFT_2703
Transcription machinery [BR:
tps03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
PAF1 complex
THAPSDRAFT_2703
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CDC73_C
Motif
Other DBs
NCBI-GeneID:
7443090
NCBI-ProteinID:
XP_002287950
JGI:
2703
UniProt:
B8BV42
LinkDB
All DBs
Position
2:complement(1631704..1633440)
Genome browser
AA seq
578 aa
AA seq
DB search
MPSTAAASPIIPLLQKACAASLPTTTSLSPDGQTLTILSTPHDATAQLTLTLPDNKTVTY
SLASIYLQLLHPGVLQYRKACEGAGVEDPVKVLDKAGITSFFLDAPSDGGVDGAEGEGTA
TPAKLDGDDMDMSDEEAKEREQQKEASSREEKNRRRSGSDSRHNKDKDRRRSKSKTPSKS
DKKLVAAKQSTPITNEQLVANLSTIVDKRNKSEGKEAASGDGGASASAAGDDSVKESDGT
PADITPATTPLPFDGEHDAESEKERELLLSWLSPAGFEVNSPEVAAAIEADRDATRRITA
LEIPVGDSASILRAGAGGKGSAEANSAAANASGGGGGTTPGSVKKRDFARVLEIYQEVVQ
AEEKAKRASSSGSKRPAPPGGPSSSSKSVRGAGSGAAAAVGASVAKIDGNPIIVVPNAMT
SCITMVNAGFFLGKEATFIPRDQAVKRPDAGKRGGTISITRKLTSRLGGGDITFDIIDNP
TTRLQKEDWNRVVAVIAQGASWQFKGWRYSEPVDLFSRAFGFYVGLEGAAVPNELKGWNC
KIGKVSRDRRGLDNICLASFWNGLDEFMAVHKQGYSRM
NT seq
1737 nt
NT seq
+upstream
nt +downstream
nt
atgccgtccaccgccgccgcctcaccaatcatacccctcctccaaaaagcatgcgctgcc
tccctcccaacaacaacctccctctctcccgacggccaaaccctcaccatcctctccacc
ccccacgatgcgaccgcacagctcaccctcacccttcccgacaacaaaacggtgacttac
tcacttgcctcgatctatttacagttgttgcatccgggggtgttgcagtatcgtaaggct
tgcgagggtgcgggtgtggaggatccggtgaaggtgctggataaggccggtattactagt
ttcttcttggatgcaccgtcggatggtggggttgatggggcagagggagaaggcaccgcg
acacccgcgaaactagatggagatgatatggacatgtctgacgaagaggccaaagagcgc
gaacagcaaaaggaagcatcgagtcgtgaagagaagaatcgtcgtcgtagtggaagcgac
tctcgtcataacaaagacaaggatagacgacgatccaaaagtaaaacgccctccaaatcg
gacaagaagctggtggctgccaaacaatctactcccattacgaatgaacagttggttgcc
aacttgagtactatcgtggataaacgtaacaaatcggaggggaaggaggctgcatcggga
gacggaggtgcatccgcatcagccgcgggggacgacagcgtgaaagaatcagatggaact
cccgcagacattacacccgccacgacaccgttgccattcgatggcgaacacgatgccgaa
tcagaaaaggaaagggagttgctcctctcatggctgtcgcccgctggatttgaagtgaac
tctcccgaagtggcagcggcaatcgaggcagatcgggatgccacccgtcgtatcaccgct
ttggagattccagttggagattcggctagtattttacgtgcgggtgccggagggaaaggg
agtgccgaagcgaatagtgctgctgccaatgcatccggtggaggtggcggtacaacaccg
ggaagtgtcaagaagagagactttgcacgagtattggagatttatcaggaggtggtacag
gcggaagaaaaggcaaaacgtgcttcttcttcagggagtaaacgacctgctcctccgggt
ggtccttcgtcttcttccaaaagtgttcgtggggcgggtagtggtgccgcggctgcggtg
ggtgcttccgtggccaagattgatggaaatcccatcattgtagtgccgaatgcaatgact
tcttgtattacaatggtgaatgcgggattcttcctcgggaaagaggcaacgttcattcct
cgtgatcaggccgtgaaacgaccggatgctggaaagaggggagggaccatttccatcact
cgaaagttgacgtctcgtttgggtggtggagacattacgtttgatatcattgacaatcca
actactcgtcttcagaaggaggactggaacagagttgtggcagtaattgctcagggagcc
tcatggcagttcaagggatggagatattctgaaccggtggatttgttctcgagggcgttt
ggattctatgttggattggagggagcggctgttcctaacgagttgaagggatggaattgc
aagattggcaaggttagtagggataggagggggttggataacatttgcttggctagtttt
tggaatggattggatgagtttatggctgtgcacaagcagggatactctagaatgtag
DBGET
integrated database retrieval system