Thalassiosira pseudonana: THAPSDRAFT_270359
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Entry
THAPSDRAFT_270359 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03403
magnesium chelatase subunit H [EC:
6.6.1.1
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00860
Porphyrin metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00860 Porphyrin metabolism
THAPSDRAFT_270359
Enzymes [BR:
tps01000
]
6. Ligases
6.6 Forming nitrogen-metal bonds
6.6.1 Forming coordination complexes
6.6.1.1 magnesium chelatase
THAPSDRAFT_270359
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
CobN-Mg_chel
DUF3479
PSD2
Motif
Other DBs
NCBI-GeneID:
7449611
NCBI-ProteinID:
XP_002290653
JGI:
270359
UniProt:
B8C2L0
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All DBs
Position
5:complement(899360..904137)
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AA seq
1414 aa
AA seq
DB search
MKKALIYIYCFGSATAFVPGGGRSVALRPSQLSPTQTHPLALEDPRRKSSTSILSSLLSK
EDVTASTPESINSPDTINVVLVTGFESFNRDLYEQSAALLPPELSVNLSVFSDSDIRTSK
RFASAVQTADIFIGSLIFDYDDVVAVSKLLDNVRGPRLVFESATELMTYNRVGKFSMETA
GDEPSGPPPAIKAVLNKFSSGKEEDKISGYLKMLKFGPDLLKYIPGEKASDLRTWLESYR
FWNQGGVNNVKAMLQIIAQQYLLEKSNGKSKEIESLPVPELEVTPDVGLIHPLQLAKQHK
FKLAPNDAPRIAILLYRKHVITNQRYIQDLIRMFEEQGFVPVPVFINGVEAHTIVRDWLT
SQHEIDGVKKREIVRDATYKPSEALEVDGIVSTIGFPLVGGPAGSMEAGRNVDIAAKLLE
SMDVPYIVASPLLLQSIPIWKSNGVLGLQSVVLYSLPELDGAIDTVVLGGLVGDKIALVP
ERVRKLCNRLRGWIDIRKTPPSERKVTIMLYGFPPNVGAVGTAALLDVPSSLENLLRRLH
DEQYNVGEFATDPNASGQSLVAALSILCESSVIAGGAARMQTVIEQRMRRASDGDATVPE
TLANPGGGLGGAKVKGADMNFDDLEKMMGKLMSKKVRRAWPESERGPGINAKGEMTVAGL
ELGNIFITVQPLLGVEGDPMRLLFERDLTPHPQYCAAYEWMRLPEDLGGAGAQAVIHLGM
HGTVEWLPGQPLGNDRQSWSDEMLGGLPNIYVYAANNPSESILAKRRGYGTLVSYNVPPY
GRAGLYLELANLKDLVNEYRTGETTSSKNRSDLRESIFASCERTGITSDVPLSGNIDSLD
SLSDELFDDWVARVSNYLVELEERLFSSGLHSLGSQPTDEELRSYLNAYFCDRLTEDEIK
HVISARHTDNIKHQWWPSFVSWLQEFSSSFVDTDGRDSSQDVQSVNVTEKVSLTREARDI
VTLLSKNTEEMSSVINALNGGYILPAPGGDLLRDGTSVLPTGRNIHALDPYRMPSAGAWA
RGERAAAEIIKQHKEANNGAYPGTVAVTLWGLDTIKTRGESIAIVLSLVGARPVKEGTGR
TVNYELIPLEELGRPRIDVLASLSGIFRDSFANVVDLLDDMFERAAIADESPDMNYIKMH
SMELEAEGNDRPAARLFSNPPGDYGSMVNEVVGTGDWDESEKLGEIWKGRNAYSYGRNEG
GGGTRSGTARPQVLDKLLSTTERVIQEIDSVEYGLTDIQEYYANTGALKKAAENRKEIES
STGKKKKVAVSVIEAFGGGVSGNDTVQVKDVEDVLRLEYRSKFLNPKWRDAMLQQGSGGA
YEVSQRMTAMVGWAATADVDNFVFDQAAERYALDEEVASKLQKSNPEAFKNVVRRLLEAN
GRGMWDTDDETIEKLRNLYSDADDLVEQVASSFG
NT seq
4245 nt
NT seq
+upstream
nt +downstream
nt
atgaagaaagcattaatttacatctactgcttcggttcggcaactgccttcgtgccgggc
ggcggtagatctgtcgctctaagaccatcacagctctctccaacacaaacacacccttta
gcactggaggacccaagacgaaaatcgtcgacctccatcttatcctctctattatccaaa
gaagacgtgaccgcatcgacacctgaatccatcaattcacccgataccattaatgttgtt
ttagtgacgggctttgaaagcttcaacagagatctatacgaacaatcagcagcgttgcta
ccaccagaactgtctgtcaacctgtcagtgttttcagactcagatatcagaacatcgaag
cgatttgcaagcgctgttcaaactgcagatatattcatcggatcactcatatttgactat
gatgatgtagttgccgtttccaagctactcgacaatgtacgtggacctcggcttgtattc
gaaagtgctaccgaactcatgacttacaatagagttggtaaattcagcatggagacggct
ggagacgaaccatcaggtcctcctcctgcaatcaaagcagtactgaacaagttttcatcg
gggaaggaggaagacaagattagtggctatctcaagatgctcaagtttggtccagatctg
ttgaagtacattcctggagaaaaggctagtgatctgaggacgtggcttgaatcgtatcgg
ttttggaaccagggaggagtaaataatgttaaagcaatgctccagatcattgcacaacaa
tatcttctggagaagagtaatggcaagtcaaaagaaattgagtctctcccggtaccagag
ttggaagtgactccagatgttggactaatacaccctcttcaacttgcgaagcaacacaag
ttcaaacttgcacccaatgatgcacctcgcattgcaatccttctatatagaaagcacgta
atcaccaaccagaggtatattcaagatttgatccgtatgtttgaagaacaagggtttgtt
cccgttcctgtctttatcaatggcgttgaagctcacaccatcgtgagagattggctcact
tcccagcacgagatagacggtgttaagaagagggagatagtacgagatgcaacgtacaaa
ccgagtgaagcgctagaagttgatggaatagtttctacgatcggtttcccccttgttgga
ggaccggctggcagtatggaggctgggagaaacgttgacatcgcagcgaaacttttggag
agcatggacgttccctatatagttgccagtcccttattactacaaagcataccgatatgg
aagtcgaacggcgtattggggttgcaatccgtggttctttattcgttgccagagctggat
ggtgccatcgatactgtcgttcttggagggttggtaggggacaagattgcactcgtgcct
gagcgagtgcggaagctgtgcaatagactacgaggctggattgacattagaaagacgccg
ccttcagagcgtaaggtgacaatcatgctctatggctttccaccaaacgtgggagcggtc
ggcactgcagctttgcttgacgtgcccagctccctggagaatttgctcagacgattgcac
gatgaacaatacaatgttggtgagttcgccacagatccaaatgcaagtgggcagtctttg
gtggctgcactatcaattctttgtgagagttcagtaatagctggcggtgctgcgagaatg
caaacggtaatcgagcaacggatgagacgtgccagtgacggtgacgcaactgtacctgaa
acacttgcaaatcctggtggtggactgggaggtgccaaagttaaaggagctgacatgaac
tttgatgacttggagaagatgatgggaaagttaatgtcaaagaaagtgaggagggcatgg
ccagagtccgagcgaggccccggtatcaatgccaaaggtgaaatgacagttgcaggacta
gaactaggcaacatattcattacggttcagcctcttttaggcgttgaaggggacccgatg
aggctgctatttgaacgcgacttgactcctcaccctcagtattgtgccgcgtacgagtgg
atgcggttgccagaggatttgggcggtgctggagcccaggcagtgattcatctcggtatg
catgggactgtagaatggctacctggacagcctctaggcaatgataggcagagctggagc
gacgagatgcttggaggactgccaaacatttacgtgtacgcagctaataaccccagtgaa
agcatcttggcaaagcgaagaggatatggtacacttgtgagctacaacgtacctccgtat
ggcagagcagggctgtacttggaattggcaaacctaaaagatctcgtcaacgaataccgt
acaggcgaaacaacatcttcaaagaacagatctgatctccgagaatccatctttgcatcc
tgtgaacgaactgggattacttccgatgttccactgagtggtaatatcgactcgttggat
tctttaagcgacgaattgttcgatgattgggtggcacgtgtctcaaactatctcgttgag
ctggaagaaagattgttctctagtggattacattcacttggcagccagccaactgacgag
gagctgcgctcatatttgaatgcttatttttgtgatagacttacggaggatgagataaag
cacgttatttcggcaagacacacagacaacataaagcatcaatggtggccgtcatttgtt
tcgtggctgcaagaattctcgtcaagctttgtggataccgatggccgcgatagttcacaa
gatgtgcaaagtgtcaacgtcacggagaaagtatcgttgacgagagaagcaagggatatt
gtcactctgctatccaaaaacacagaagaaatgtcttccgtgatcaacgctctgaacggt
ggatatattcttcctgctcctggtggcgatctgctcagagatggcacatcagtactcccc
actggtcgtaacattcatgctttggatccctatcggatgccatcagcaggtgcgtgggca
agaggagagagagcagctgcagaaatcattaagcagcacaaggaagcaaacaatggggcc
tatcctgggacagtagccgtcacactttgggggttggatactattaaaacaagaggagaa
agcatagccattgtactgtcattggttggagcaagaccagtgaaagagggcaccggcaga
actgtgaactatgagctgataccgttggaagaactaggcagaccacgcattgatgttctc
gcgtcgttatcaggaatcttccgcgattcatttgctaatgtagtcgacctattggacgat
atgttcgagcgggcagcaatcgctgatgagtctccagacatgaattacataaagatgcac
tctatggagctggaggcggaaggcaatgaccgaccagctgctcggctctttagcaatccg
cctggggactatggaagcatggtaaacgaggttgtaggaacgggtgattgggatgaaagc
gagaaactcggcgagatatggaaggggcggaatgcgtactcgtatggacgaaatgaaggg
ggaggaggaactcgatcaggtacagctcgtccacaagtactggataaactattgtcgacg
accgaaagagttattcaagagatagactcagtggagtacggactcaccgatatccaagag
tactacgcaaacactggagcgctgaagaaagccgccgagaatcgcaaagagatcgaaagc
tctacaggaaagaagaaaaaggtagcagtatcagttattgaagcctttgggggaggtgtc
tctggtaatgatacagtccaggtcaaagatgtggaagatgtattgagactagaatatcgc
tcaaagtttctaaatcccaagtggagagatgcaatgctgcagcaaggaagtggtggtgct
tacgaagtgtctcagcggatgacggcaatggttggatgggcagcaacagctgatgttgac
aacttcgtttttgatcaagccgcagaacggtacgccctcgacgaggaggtcgcaagcaag
ctacaaaagagcaatcccgaagcattcaagaatgttgtgcgacgtcttctagaagcaaac
ggcagaggaatgtgggatactgatgacgaaacaatagagaaattgaggaatctttacagc
gacgcggacgatcttgttgagcaagtggcatcgtcctttgggtag
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