Thalassiosira pseudonana: THAPSDRAFT_27083
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Entry
THAPSDRAFT_27083 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K03250
translation initiation factor 3 subunit E
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_27083
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_27083
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_27083
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-3
THAPSDRAFT_27083
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Assembling factors
Other assembling factors
THAPSDRAFT_27083
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_27083
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
eIF3_N
PCI
EIF3E_C
Motif
Other DBs
NCBI-GeneID:
7444646
NCBI-ProteinID:
XP_002287841
JGI:
27083
UniProt:
B8BUG4
LinkDB
All DBs
Position
2:complement(1089199..1090911)
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AA seq
465 aa
AA seq
DB search
MTSPAPADAAADDAANYDLTSLISPYLDLHMMFPLLEYIDSLISTGSVSYSSSDVAQARL
KLLKPTHMVDYAMDIYREVHGENAEIPKDMEDQKVEVFRELEELREGQMKLDELFRNEEV
RANLVQNNQWNVKSLIAATSYGITSDTIAAYYKFAKFNFDCGDYQQGPAAKSSPAEDEKT
GNPNMYYLTSIDTTLLQVLWGKLSCEILVEDWEEASVALVAVKTAIDLFVFWNDASGKGL
ESMVELFTSEKYLQAVTTHAPHLLRYLTAAVLLCKRRAAKKAGSNSNAEGRRLLRDLVKV
MQQCEYSDPIVEFVDKLSVKFDFEAAQSQLARCETVLSSDFFLCKQTELFMEEARVFVFE
NYCRIHHKIDLTTLGEKLAMDRDRAERWIVDLIRNALLDAKIDSEEGCVVMGTGSTSVYE
QVMDKTRDLTARSGGLVVNLRGYVNDARREKIRKERKATEEAEAY
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgacatccccagcacccgccgacgcggcggccgacgacgcagccaactacgacctcacc
tccctcatctccccctacctcgacctccacatgatgttccccctccttgagtacatcgac
tctctcatctccaccggctccgtctcgtacagctcgtccgatgtggcgcaggctcgtttg
aagttgctcaagccgacgcacatggtggattacgccatggacatttatcgcgaggttcat
ggcgagaatgcggagattccgaaggatatggaggaccaaaaggtggaggtctttcgggag
ttggaagagttgagggagggacagatgaagttggatgagttgtttcgtaatgaggaagtt
cgggccaatctcgttcaaaacaaccagtggaacgtcaagtctctcatcgccgccacctcc
tacggcatcacatccgacaccatcgctgcgtactacaaattcgcaaagttcaactttgac
tgtggagattaccaacagggacctgctgccaaatcttctcctgccgaggatgaaaagact
ggaaatcccaacatgtactatctgacttctattgacactactctcctccaggtcttgtgg
ggcaagctctcttgtgagattcttgtcgaggactgggaagaggcatccgtcgccctcgtt
gcagtcaaaacggccattgatttgttcgtcttttggaacgatgcttctggcaagggattg
gagagcatggtggagttgttcacctcggaaaagtacctccaggctgtcactactcatgct
cctcatttgctgagatatctcactgcggctgtcttgctgtgcaagcgccgtgcggcaaag
aaggctggaagcaactccaacgctgagggacgtcgattgctacgtgatttggtcaaagtt
atgcaacaatgcgagtactctgatcccattgtagagttcgttgataagctctcagtgaag
tttgattttgaggctgcccaatcgcaactggcgaggtgcgagactgtcctctcgtctgac
ttcttcttgtgcaaacaaacggagttgttcatggaggaggcacgtgtctttgtgtttgag
aactactgccgaattcaccacaaaatcgacttaacaaccttgggtgaaaagcttgccatg
gatcgtgaccgtgctgaacgttggattgttgatttgatcagaaatgcactgttggatgcc
aagatcgattcagaggaaggatgtgtggtgatgggaactggaagtaccagtgtgtatgag
caggtgatggacaagacgagggatctcactgcaaggagcgggggtctggttgtgaacttg
agagggtatgtcaatgacgcgagaagggagaagatcagaaaggagaggaaggctacggaa
gaggcagaagcctactaa
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