Thalassiosira pseudonana: THAPSDRAFT_273
Help
Entry
THAPSDRAFT_273 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03243
translation initiation factor 5B
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_273
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
eIF-5
THAPSDRAFT_273
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GTP_EFTU
IF-2
GTP_EFTU_D4
MMR_HSR1
GTP_EFTU_D2
Roc
ATP_bind_1
AAA_22
Ras
Motif
Other DBs
NCBI-GeneID:
7446674
NCBI-ProteinID:
XP_002287939
JGI:
273
UniProt:
B8BV18
LinkDB
All DBs
Position
2:complement(<1577691..>1579466)
Genome browser
AA seq
591 aa
AA seq
DB search
MGHVDTGKTKLLDKIRKTNVQEGEAGGITQQIGATYFEKSTLLTQTAKLNETEKFDLTLP
GMLVIDTPGHESFTNLRSRGSSLCDVAILVVDLMHGLEQQTIESLHMLKNRGTPFVVALN
KVDRCYAWKTCKDTPIRDALKEQSDGTLNEFRSRASDAKLQLQEQGVNSNIYWEMGDDDW
ENSDFVPLVPTSAVTGEGVQDILMLLCQIAQRKLWSQLMWCANLQATVLEVKAIDGLGMT
VDVLVVNGYLREGDRAVFCTLDGPIVAEIRGLLTPPPSREMRIKSEYIHHKEIKGALGVK
VIGNGLEKVMAGTSVLVVGPDDEVEDIKAEVMSDLTKLQDKLSTDKKGVMVQASTLGALE
ALLQFLREETKPPIPVSAIGIGTIHKRDVTKISIMNEKGCPEYATILAFDVPVEREAREQ
AEEVNVRIFTADIIYHLFDQFTRFMEQLTEKRREDAAAIAVFPSIIKILPQHVFNQKDPI
IVGVEVVEGILKVGTPLCVPALGGLTVGTVTSIESNGREQETAKKGSSVAIKIVNESNPT
ITYGRQFDASHSLYSHLSRASIDALKLHFKEKLETEDWRLVVKLKKVFNII
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atgggtcacgtcgatactggaaagacaaagttgttagataagatccggaagaccaatgtg
caagagggtgaggctggtgggattactcaacaaattggtgccacctactttgagaagagt
actttgttgacacaaactgcaaagttgaacgagactgaaaagtttgacttgaccttgccc
ggaatgttggtgattgatacacctggtcatgagtccttcaccaatcttcgttctcgtggt
tcgtccttgtgtgatgtggctattttggtggtggatctcatgcatggattggaacagcag
actattgagagtcttcacatgttgaagaaccgtggtactcccttcgtggtggcattaaac
aaggtggataggtgttatgcatggaagacttgcaaggatactcctatccgtgatgcactg
aaagagcagtcggatggcactttgaatgagttcagatctcgtgcaagcgatgctaagttg
caattgcaagagcagggtgtcaactcaaatatttactgggagatgggggacgatgactgg
gaaaactctgactttgtacctttggtccctacgagtgccgtcactggagagggtgtgcaa
gatatcttgatgcttttgtgtcaaatcgcacagaggaagttgtggagtcagctcatgtgg
tgcgccaacttgcaagctaccgttctggaagtaaaggcgattgatggtctcggaatgact
gtcgacgttctcgttgtcaacggatacttgagggaaggtgatcgtgccgtattctgtaca
cttgacggacccatcgtggctgaaattcgtggtctcctcactcctcctccaagtcgcgag
atgcgtatcaaatcagagtatatccatcacaaggaaattaagggtgctcttggagtcaaa
gtgattggaaacggattggaaaaggtcatggctggaacttccgtgttggttgtcggtccc
gatgacgaggttgaggatatcaaggcagaggtcatgtccgatttgacaaagttacaagac
aagttgagtactgacaaaaagggagtcatggtgcaagcgtcaacccttggagctcttgag
gcattgttgcagttcctacgtgaggagacaaagccacccattccagttagcgctatcggc
attggtactatccacaaacgtgatgtgactaagatctccatcatgaatgaaaaaggatgt
cctgaatacgctacaatccttgcatttgatgtccctgtggaacgcgaggctcgtgaacaa
gctgaggaagtcaacgttaggatcttcactgcggatatcatttaccatctctttgatcaa
ttcacaaggtttatggagcaacttacggagaagcgtagagaagacgctgccgctattgct
gtctttcccagtatcatcaaaattttgcctcagcacgtctttaaccaaaaagatcctatc
attgttggtgtggaggtggtggagggaattctcaaggttggcactcctctctgtgtccct
gccttgggtggtctcaccgttggaactgtgacatctattgagagcaatgggcgtgagcaa
gaaacggcaaagaaggggtcttcggttgcaatcaagattgtgaatgagtcaaacccaaca
atcacgtacggaaggcaatttgatgctagtcacagtctgtactctcacctctcgcgtgct
tccattgatgctttgaaattgcatttcaaggaaaagctagagactgaggattggcgtctg
gtggtcaagctcaagaaggtatttaacattatatga
DBGET
integrated database retrieval system
