Thalassiosira pseudonana: THAPSDRAFT_27377
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Entry
THAPSDRAFT_27377 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S9
BD-FAE
DLH
PD40
Hydrolase_4
Abhydrolase_4
Peptidase_S15
Abhydrolase_3
Phage_RBD_prop
Motif
Other DBs
NCBI-GeneID:
7441793
NCBI-ProteinID:
XP_002288241
JGI:
27377
UniProt:
B8BXB3
LinkDB
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Position
3:553109..555273
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AA seq
662 aa
AA seq
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MLDKPYGTWESPITSKAITAGSVRLGGVHICDNKIYWLEGRPQEAGRNVLCKYAPEDSNK
SERNGVDVSPKESNVRTRVHEYGGGALLMGTNEDQIYYSEFTTQRLCQLLKDGTSKPISP
EGDRFRYADGVLSEDGSLIYCVREDHEKPEPKNVVNEIVSINVSDGSMKVIATGNDFYAA
PRLSPDGKQLAYVTWAHPNMPWDATELRLTPVESSSSDSKSHELIAGIDGDTSVIQPLWH
PQTGDLHYISDQSGYYNIYRLGYETSILPMEYDFGGSAPGWALGQQGYSFLPDGRLVAQY
NKNGSSVLVVANVNQKDSPATDVQEFGSNDGLPMMFGGVSARSDNDLYFIGGSPSTPTSI
YKWNIETKDKATILACSSNTSFSDDLISIPKQIEFPTTMSRTAFGYYYPPKNGGYICTTD
KAPPLLVKAHGGPTACTGTSFNAGIQYWTSRGFAILDVDYSGSTGYGRDYRRRLKKSWGV
VDIDDVCAGAEYLVKEGLADGERLCIDGGSAGGYTTLGALAFRDVFKAGCSMYGIGDLTA
LAGDTHKFESRYLDGLVGAYPEEEELYKQRSPIESVDTLSCPILLLQGVEDKVVPPNQAE
MMHHALLKKGIPTCLKMYEGEQHGFRKAENIEDALDTELSFYGKVFGIAGIPGDVNVKVD
NM
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgttggacaaaccttatggcacttgggagtcgccgataacatccaaagccatcactgct
ggatcggttagactcggtggcgttcacatctgtgacaacaaaatctactggcttgaggga
cgtccgcaggaagcaggacgtaatgttctttgcaaatatgctcccgaagactccaacaaa
agcgaacgtaatggcgttgatgtttctccaaaggaatccaatgttcgcactcgagtgcat
gaatatggaggaggagccttgctgatgggaacgaatgaggatcagatttattattctgaa
ttcacaactcagcgtttgtgtcaattgttgaaggatggaacgagcaaacctatctcgccc
gagggagatcgttttaggtatgctgatggagtgctatctgaagatggatctttgatatac
tgtgtgagagaagatcacgaaaagccagagccaaagaatgttgtgaacgagatagtttct
atcaatgtcagcgatggatcaatgaaggtgattgcaactggaaacgacttttatgctgct
cctcgtctgtctcctgatggaaagcagttagcttacgttacgtgggcacatccaaatatg
ccgtgggacgccacagaattgagactgacaccagttgaatcgtcatcgagtgattctaaa
agccacgagcttattgctggtattgatggtgatacatccgtcattcaaccgttgtggcat
cctcagacaggggatttgcattacatttctgatcagagtggatactataacatctatcgc
ttgggatacgaaacatcaatcttgccgatggagtatgattttggcggaagtgctcctggg
tgggctttgggacagcaagggtacagcttcctacccgatggtagactcgtagcacagtac
aataaaaatggaagttctgtgttggttgtggccaatgtcaaccaaaaggattctcctgct
acggatgtgcaagagtttggaagcaacgatgggctccccatgatgtttggaggtgtatct
gctaggagcgacaacgatttgtacttcatcggaggcagtcctagtacacctacatcaatt
tacaagtggaacattgaaaccaaagacaaagcaacaatcctcgcatgctcctccaacact
tcgttttcagatgacctgatctctattccaaagcaaattgagtttcctacaacaatgagt
cgtacagcttttggatactactatcctcctaagaatgggggatacatctgtaccacggac
aaagcacctccattgcttgtaaaagctcacggaggtccgactgcttgtactggaacgtca
ttcaatgctggcattcaatattggacctctcgtggctttgctatcttggacgttgactat
tcgggatctactggttatggacgtgattatcgccgtcgattgaaaaagtcttggggtgtt
gtggacattgatgatgtttgtgctggagctgaatatttggtgaaggagggattggcggat
ggtgagcgtttgtgcattgacgggggaagtgcgggaggttacactacgttgggtgctctc
gctttcagagatgtattcaaagcaggttgttcaatgtatggtatcggagatctcactgct
cttgcaggcgatactcacaaatttgagtcgagatatctcgatggtctcgtcggcgcttat
ccggaggaggaagagttgtacaaacaacgatcaccaattgaaagtgttgatacgttatcg
tgtcccatcctgctgttacaaggtgtggaggataaggtggtacctccaaatcaggcagaa
atgatgcatcatgctctgttgaagaaaggcattcccacgtgcttgaagatgtatgaaggt
gaacagcatggattcagaaaagctgagaatatcgaagatgccctagacactgaattgagt
ttttatggcaaagtatttggtattgctgggatcccaggtgatgtgaatgtcaaagtggac
aacatgtag
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