Thalassiosira pseudonana: THAPSDRAFT_27557
Help
Entry
THAPSDRAFT_27557 CDS
T01078
Name
(RefSeq) ABC transporter
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC2_membrane
ABC_tran
ABC2_membrane_7
ABC2_membrane_3
AAA_21
RsgA_GTPase
AAA_23
AAA_22
AAA_25
cobW
nSTAND1
AAA_16
AAA_29
AAA_28
MMR_HSR1
AAA_18
Roc
T2SSE
Motif
Other DBs
NCBI-GeneID:
7449509
NCBI-ProteinID:
XP_002288451
JGI:
27557
UniProt:
B8BYH1
LinkDB
All DBs
Position
3:1547769..1550289
Genome browser
AA seq
613 aa
AA seq
DB search
MMGISRRASTTEERRNPFAAREGNALIWTGVNMTLNKKQGERKLLNDVWGEVPPGEITAI
MGPSGAGKTSLLNILAGRCRSNSKITVESDIRMKDFKVDPTNIEVRKQIAFVAQDDSLSF
TATPREAIRFSAKLRLPRITTDDEIEELADKMLKELGLKDCADTMIGGNLIKGISGGERK
RTSVGVELVTKPSLVFLDEPTSGLDSFSAMQVIRVLKKIAHAGCSVLFTIHQPSSDVFNS
FDRLILLNKGMVMYQGPVDDVPDYFAQHNHPMPKNYNPADWIMEVAQQYSQDQLLQEGFF
SKDERNLSPAIIPKDSELLDSLGVSRHEDISDDEWKHVGFGTEARLLFKREIIHNSRNKK
GVGARFALTTFMAFLVGNIFFGVGNVDSFYDVSKFNSHFGAMVMILMMSMFGTAMPTLLS
FPEERPVFLREYSTNHYSVIAYFMSRLAMEALITFLQVFVLLIIAYFMVDLQAGFFRFLA
IEYALAMSSTAVAVLLGCAVEDPTMATEFLPLLFVPQLLFAGFFVRTDLIPPWLRWAQYL
CALTYGVRLALLAEFGDCANDETIKPNICSQLLEVNEVKEEERAIYWAILWGLFLVFRLG
GLTLLRKKATKFY
NT seq
1842 nt
NT seq
+upstream
nt +downstream
nt
atgatggggatatctcgacgtgcttctactacggaggagaggaggaatccttttgctgcg
agagaggggaacgctttgatttggaccggtgtcaacatgaccttgaacaaaaagcaaggc
gagaggaaactactcaacgatgtttggggagaggtgccgccaggagaaatcacagccatc
atgggtccttcgggggcaggaaaaacctccttgttgaacatccttgcaggacgctgtaga
tccaactccaaaatcactgttgaatctgatatccgtatgaaggacttcaaagtagaccca
accaatattgaagttcgcaaacagatcgcttttgtagcccaagacgattctctatcattc
acagcaactcccagagaagctattcgttttagtgccaagttgcgtttgcctagaattact
accgatgatgaaattgaggagttggcggataagatgttgaaagagttggggttgaaagat
tgtgctgatacgatgattggagggaacttgattaaaggcatttcgggaggtgagcggaag
agaacaagtgtgggtgtagagctggttacgaaaccttcgttggtgttcttggatgagcca
actagtggacttgattccttctctgcaatgcaggtgattcgggtcctaaagaagattgct
catgctggatgctcggtactcttcacaattcaccaaccttcctcggacgtcttcaatagt
tttgataggcttattctcttgaataaaggaatggtcatgtaccaggggccagtggatgac
gtgccggattactttgcacaacacaatcacccgatgccaaaaaattataatcctgcagat
tggattatggaggtggcacaacaatactcacaggatcagttgttgcaggagggtttcttt
tctaaagacgaacgcaacctttctcctgcaataatcccaaaagattcggaactgttggat
tcactgggggtttcgaggcacgaagatattagcgatgatgagtggaaacatgttgggttt
ggaacggaagcccggttgctcttcaaacgagagatcattcacaattctagaaacaaaaaa
ggagttggtgcacgatttgctttgacgacgttcatggccttcttggttgggaacatattc
tttggtgtaggcaacgttgattcattctacgatgtttcgaaattcaacagccactttggg
gctatggtcatgatcttgatgatgtccatgtttggaacggcaatgccgaccctcctatct
ttcccagaggagcgccctgtctttttgagagagtactcaaccaaccactacagcgtcatt
gcatatttcatgtcacgtcttgcaatggaggctttgatcaccttcctccaagttttcgta
ctgctaatcatcgcgtacttcatggtggatctacaagctggctttttcagattccttgca
atcgagtatgcattggcaatgagtagtacagccgtcgccgtactcctgggatgtgccgtc
gaagatcccacgatggcaaccgagttcctccctctcctctttgtacctcagcttctgttc
gctggattctttgttcgtaccgatttgatccctccatggttacgatgggcacagtatctg
tgtgcgttgacgtacggagttcgtttggctcttcttgcagagtttggggattgtgccaat
gacgaaacgataaaacctaatatctgttctcaattgttagaagtcaatgaagtgaaagag
gaagagagagcaatttattgggctattctttggggcttgttccttgtgttccgtcttggt
gggcttacgttattgcggaagaaagcaaccaagttctattga
DBGET
integrated database retrieval system