Thalassiosira pseudonana: THAPSDRAFT_27892
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Entry
THAPSDRAFT_27892 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K00819
ornithine--oxo-acid transaminase [EC:
2.6.1.13
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00330
Arginine and proline metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Module
tps_M00972
Proline metabolism
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09105 Amino acid metabolism
00330 Arginine and proline metabolism
THAPSDRAFT_27892
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tps01007
]
THAPSDRAFT_27892
Enzymes [BR:
tps01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.13 ornithine aminotransferase
THAPSDRAFT_27892
Amino acid related enzymes [BR:
tps01007
]
Aminotransferase (transaminase)
Class III
THAPSDRAFT_27892
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
Beta_elim_lyase
KYNU_C
Motif
Other DBs
NCBI-GeneID:
7447965
NCBI-ProteinID:
XP_002289802
JGI:
27892
UniProt:
B8BZE7
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All DBs
Position
4:complement(1150706..1152569)
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AA seq
455 aa
AA seq
DB search
MSLRSSMQASRRVFQTAASTHRSIVSSVCRRSFSAGNEPAISDLSASYIALEEKYGAHNY
HPLPVVLTKGEGTRVWDVDGNKYFDFLSAYSAVNQGHCHPKIISALVEQAHKMTLTSRAF
HNDCLGHYVEFMTEYFGYDRILPMNTGVEGGETAIKLARRWAYDVKGVPKNQARVIFAGN
NFWGRTLAAISSSSDPTAFTGFGPYMPGFSSVKYNNLEELEAEFKRDGANIAAFMVEPIQ
GEAGVVVPFDGYMSEVKKLCEKYNVLLIADEVQTGLGRTGYRLAVDHDNCKPDILVLGKA
LSGGVLPVSAVLASNEVMLTLKPGEHGSTYGGNPLACKVATAAIEVLRDEKLAENSDARG
QQLRAGLESLTGNTCIEKVRGRGLLNAIVIDQPKMGYGDHGKAWDVCVQMKENGLLAKPT
HGNIIRFAPPLTITESEVDECLSIIEKSVKQVDSM
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtctctccgatcctcaatgcaagcttcccgtcgtgttttccaaaccgccgcatcaact
caccgctcgatagtatcatcggtgtgccgtcgttccttctcggctggtaacgaacctgcc
atttcagatttgtcagcttcttatattgctcttgaggaaaagtatggtgctcataactac
catcctttgcctgttgttttgacgaagggagaaggaacccgcgtttgggatgttgacgga
aacaagtactttgatttcctctccgcttactctgccgtcaaccaaggtcactgccatccc
aaaatcatctcggcacttgtggagcaagctcacaaaatgactctcacttctcgtgccttc
cacaacgattgcctcggtcactacgttgaattcatgaccgagtacttcggctacgatcgc
atccttccaatgaacacgggtgtggaaggtggcgaaactgccatcaagttggcacgtagg
tgggcatacgatgtgaagggagttccaaaaaatcaggcccgtgttatcttcgctggaaac
aacttttgggggaggacgttggctgctattagtagttcgagtgatcctactgcctttact
ggttttggtccttatatgcctgggttctcaagtgttaaatacaataatctcgaggagctg
gaagctgaattcaagagggacggcgccaatattgcagcctttatggttgaaccaatacag
ggagaggcaggtgttgtagttccttttgatggctacatgtcggaggtgaagaagctgtgc
gagaagtacaatgtgctcttgattgccgatgaagtacaaactggtttggggcgtactgga
tacaggcttgctgttgatcacgacaactgcaaaccagacattcttgtgcttggaaaggct
ctttctggtggtgtgctcccagtatctgccgttcttgcatctaatgaagtcatgcttaca
ttgaagcctggtgaacacggttctacgtacggaggaaatccattggcatgcaaagtcgca
actgcagcaattgaagtcctccgtgacgaaaagcttgccgagaattctgatgctcgggga
cagcaacttcgtgctggattggagtcattgaccggcaacacatgcattgaaaaagttcgt
ggacgtggacttctaaatgctattgtcattgatcagccaaagatgggatacggtgatcat
ggaaaagcttgggacgtctgtgtgcagatgaaggagaatggcctcttggccaagccaaca
cacggcaacatcattcgttttgctcctcctctcactattaccgaatccgaggttgatgaa
tgcctgagtatcattgagaagagtgtgaagcaagtcgatagtatgtaa
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