KEGG   Thalassiosira pseudonana: THAPSDRAFT_27986
Entry
THAPSDRAFT_27986  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K14617  LMBR1 domain-containing protein 1
Organism
tps  Thalassiosira pseudonana
Pathway
tps04980  Cobalamin transport and metabolism
Brite
KEGG Orthology (KO) [BR:tps00001]
 09150 Organismal Systems
  09154 Digestive system
   04977 Vitamin digestion and absorption
    THAPSDRAFT_27986
   04980 Cobalamin transport and metabolism
    THAPSDRAFT_27986
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPSDRAFT_27986
Membrane trafficking [BR:tps04131]
 Endosome - Lysosome transport
  Others
   Lysosomal membrane proteins
    THAPSDRAFT_27986
SSDB
Motif
Pfam: LMBR1
Other DBs
NCBI-GeneID: 7442337
NCBI-ProteinID: XP_002289422
JGI: 27986
UniProt: B8BZW6
LinkDB
Position
4:1568386..1570206
AA seq 529 aa
MADVFLILVIVIAFVILTIVGLYLVVKYQHPDDKNDAYVPKLVVLFGFVLSGATVLLLPL
DVANNEGYAGLNMALFWEIFYWLITAWIFFLIPFSMFYYEADDGMLMAGTSVGAKPNSRI
CEAVKYEMFVVVIFGLIFSMTYLFMNSTDIPVREVMGPSFSSGASYSITARDTEGFSSSQ
LAVMGSADSAVLGLNRVNPTLGSIELSVNASTFYAGLMAWLGWFLFALFGAIGLAALPLD
LILAFVHRPHHMDAVEFAEAQMSLRDRVNELVSVGELIKLEREERAQQNGGKGGGFFNKE
ARKQAAEEKKTLLQFKQAVYLLEEDAEDFANCSENYKNYNPLIPIGCLIGGILAFIISIF
WVLHIILYMLPAEPVTPFLNSFFQWFKWFPLFGVLCVAIFSFYLLMAALKGCFKFGLRFL
FFQVHPMKLNKTYMSSFLFNIGLCLLCALPVVQFCASAFQDYARYTTINQVFNVQLYYLK
FFGWWWRQKIFEYVLLAIVLLTCLYLGCRPRDSSASNSINLRDRLKQRM
NT seq 1590 nt   +upstreamnt  +downstreamnt
atggcggatgtcttcctcatattagtaatagtaatagccttcgtcatcctcacaatcgtt
ggcctctacctcgtcgtgaaatatcaacatccagacgataagaatgatgcatacgtgccg
aaattagtggtgttgtttggttttgtgttgagtggtgctacagtgctcttgttgccgttg
gatgtggcgaataatgagggttatgctggcctcaacatggcactcttctgggaaatcttc
tactggctcatcaccgcctggatcttcttcctaatccccttcagcatgttctactacgaa
gccgacgacggcatgctcatggccggtacctccgtgggcgccaagcccaattcgaggatt
tgtgaagcagtcaagtatgaaatgtttgtggtggtaatatttggattgatcttttccatg
acgtatctgtttatgaatagtacggatatccctgtgagggaggttatggggcctagtttt
tcgagtggtgcgagttattcgattactgcgagagatacagaggggtttagttctagtcag
ttggctgttatgggaagtgcagatagtgctgtgcttggattgaatagagtcaatcctacg
ctgggcagtatcgagttgagcgtcaatgcctctacgttttatgctggtcttatggcatgg
ttgggatggtttctgtttgctctctttggagctatcggattggctgcattgccgcttgac
ctcatcttggcatttgtgcacagacctcatcatatggatgcagtagagtttgcggaagca
caaatgtcactacgcgatcgtgtcaatgaactagtcagcgtgggagagttgataaagctg
gaacgcgaagaacgagcacaacaaaatggtggaaagggcgggggattctttaataaggaa
gcgaggaagcaagctgccgaagagaaaaagacgttgctgcaattcaaacaggcggtgtac
ttgttggaagaggatgcagaagattttgcaaactgctcggagaactacaagaactacaat
ccgttgattccgattgggtgcttgataggggggatcttggcttttatcatctccatattt
tgggtattgcacatcattctgtacatgcttccggcagaaccagtcacgccctttctcaat
tccttcttccaatggttcaagtggtttccattattcggtgtactgtgcgttgccattttc
tccttctacctcctaatggcagcactcaaaggttgcttcaaattcggactacgattcctc
ttcttccaagtgcatccaatgaagttgaacaagacgtacatgtcgtcctttctcttcaac
ataggactatgcttattatgtgctcttccagtggtacaattctgcgcgagtgcattccaa
gattatgcacgatacactaccatcaatcaagtgttcaatgtgcagttgtactatcttaaa
ttctttgggtggtggtggaggcaaaagatctttgagtatgtgctcttggccattgtgttg
ttgacgtgtctttatctgggatgtcgaccgagggactcgagtgcttcgaatagcattaat
ttgagggatcggctaaagcagagaatgtag

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