Thalassiosira pseudonana: THAPSDRAFT_27997
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Entry
THAPSDRAFT_27997 CDS
T01078
Symbol
DAD1
Name
(RefSeq) probable dihydroxyacid dehydratase
KO
K01687
dihydroxy-acid dehydratase [EC:
4.2.1.9
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00290
Valine, leucine and isoleucine biosynthesis
tps00770
Pantothenate and CoA biosynthesis
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01210
2-Oxocarboxylic acid metabolism
tps01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09105 Amino acid metabolism
00290 Valine, leucine and isoleucine biosynthesis
THAPSDRAFT_27997 (DAD1)
09108 Metabolism of cofactors and vitamins
00770 Pantothenate and CoA biosynthesis
THAPSDRAFT_27997 (DAD1)
Enzymes [BR:
tps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.9 dihydroxy-acid dehydratase
THAPSDRAFT_27997 (DAD1)
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Motif
Pfam:
ILVD_EDD_N
ILV_EDD_C
adh_short_C2
Motif
Other DBs
NCBI-GeneID:
7443729
NCBI-ProteinID:
XP_002289902
JGI:
27997
UniProt:
B8C011
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Position
4:complement(1674657..1676990)
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AA seq
640 aa
AA seq
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MRLFISLLAIATCSEAFAPSAKLAAKFEPSSSSLRMSAGGDEPVLNKYSRVLTQPASQGA
SQAMLYATGLTEADMSKPQVGICSVWYEGNPCNMHLLELSEHVKKGVVESDCVGFRFNTV
GVSDGISMGTTGMRYSLQSRDLIADSIETTMGAQWYDGLIALPGCDKNMPGVIMAMGRLN
RPGIMVYGGTIRAGTQPSNGDTLDIVSAFQSYGQFLYDKISEEERKEIVQHSCPGPGACG
GMYTANTMATAIEALGMSLPYSSSSPADSKEKIDECERAGEAMKNLLTKDIKPRDIMTKG
AFENAIRMVMMTGGSTNAVLHLIAMSRSCQDPSVAITLDDFQRISDVTPFLADLKPSGKF
VMEDVQNIGGTPGMIKFLIDNGLFDGDQMTVTGKTHNENLAEMNHPGLTPGQEIIRPLSD
PIKPTGHLQIMYGNLCPGGGVAKITGKEGETFTGTARVYDNEQLMLRGLENKEIKCGDVV
IIRYEGPTGGPGLPEMLTPTSAIMGAGLGDCVALLTDGRFSGGSHGFCIGHITPEAQVGG
PIALVQNGDPIRIDARPDQRTIDLLISDEEWEARRKAWSPPPLRASQGTLFKYIQCVATA
SEGCVTDEVGTASAAKIAEAAPKTPAVAELEAKIAELSKN
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctcttcatctcgttattggcaattgcaacatgcagcgaggcatttgccccgtct
gccaaactggcagcgaaattcgagccctcatcctcatctctgcgcatgtcagctggcggc
gacgagcccgtcttgaacaagtacagccgcgtactaacccagccagcctcccaaggagcc
tcccaagccatgctctacgccaccggcctcaccgaagccgacatgtccaaaccccaagtc
ggaatctgctccgtctggtacgaaggaaacccctgcaacatgcacctcctcgaactctct
gagcatgtcaaaaagggcgtcgtggaatccgactgcgtaggatttcgtttcaatactgtt
ggcgtttcagatggtatttcgatgggtaccactggtatgaggtactctctccaatctcgt
gatttgatcgctgactctattgagactaccatgggtgctcagtggtatgatggtcttatt
gccttgcctgggtgtgataagaatatgcccggagtcatcatggccatgggacgtttgaat
cgtcctggaatcatggtctacggaggtaccatccgtgcggggactcagccttccaatggc
gacacgttggatatcgtgagtgcctttcagagttatggacagttcttgtatgataagatt
tcggaggaggaaaggaaggagatcgtgcagcatagttgtcctggaccgggagcttgtggc
ggaatgtacacggcgaatactatggcgaccgcgattgaggctttgggtatgtctcttccg
tactcgtctagttctcctgccgattctaaggagaagattgatgagtgtgaacgtgctggt
gaggctatgaagaaccttcttacaaaggatattaagccacgagatattatgacgaagggt
gcttttgagaatgcgattcgtatggttatgatgacgggaggatctacgaatgcggtgctt
cacttgattgccatgagtcgttcttgccaggatcctagtgttgccattactttggatgat
ttccagcgtatttccgatgtgaccccattcttggctgatttgaagccttccggaaagttc
gtaatggaagacgtccaaaacattggaggaactcctggtatgatcaaatttctcattgac
aatggcttgttcgacggagaccaaatgactgttactggaaagacacacaacgagaatctt
gctgagatgaatcaccctggattgactcctggacaggagatcattcgtcctctcagtgat
cctatcaagcctactggtcatttgcagatcatgtatggtaacttgtgtcctggtggagga
gttgcaaagattaccgggaaggagggagagacgttcacgggtactgctagggtgtacgac
aatgaacagctcatgcttcgtggacttgaaaacaaagaaatcaaatgcggagacgttgtg
atcatccgttacgagggacctaccggaggacctggccttcctgaaatgcttacccccacc
agtgctatcatgggagccgggcttggcgactgcgttgcattgctcacagatggacgtttc
agtggaggaagtcacggattctgcattggacacattacgcccgaggctcaggtgggagga
ccaatcgctcttgtccagaatggagatcctatccgtattgatgcacgtcccgaccaacga
acaattgaccttttgatctcggatgaggagtgggaggcacgtaggaaggcgtggtctcca
ccacctcttcgtgctagtcagggaactttgttcaagtacattcagtgcgttgctactgcc
agtgagggatgtgttactgatgaggttggaaccgcttctgctgccaagattgctgaggct
gctcccaaaactcccgccgtggctgagctggaggcaaagattgctgagctatcaaagaat
taa
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