Thalassiosira pseudonana: THAPSDRAFT_28049
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Entry
THAPSDRAFT_28049 CDS
T01078
Name
(RefSeq) predicted protein
KO
K02985
small subunit ribosomal protein S3e
Organism
tps
Thalassiosira pseudonana
Pathway
tps03010
Ribosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03010 Ribosome
THAPSDRAFT_28049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03011 Ribosome [BR:
tps03011
]
THAPSDRAFT_28049
Ribosome [BR:
tps03011
]
Ribosomal proteins
Eukaryotes
Small subunit
THAPSDRAFT_28049
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribosomal_S3_C
KH_2
Motif
Other DBs
NCBI-GeneID:
7452207
NCBI-ProteinID:
XP_002289506
JGI:
28049
UniProt:
B8C0D4
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All DBs
Position
4:1990485..1991377
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AA seq
270 aa
AA seq
DB search
MTMANRSKMSIKRRFVADGVFYAELNELLTRELAEDGYAGVEVRTTPHRTEIIIRATKTQ
NVLGEKGQRIRELTSVVQKRFDFAEGAVELYAERVQNRGLCAQAQAESLKFKLLAGLAVR
RACYGVVRFVMEASAKGCEVIVSGKLRGQRAKGMKFGDGYMIKTGHAGQVYTDVAVRHVL
MRQGVIGIKVAIMLPHDPKGVQGPKIPLDDVVTILEPKEEPSPESILQAQQAAEAAAAAA
AQAALQQQLLAQQQAEMAAAGGAPAVDAGF
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggccaaccgatccaagatgagcatcaaacgcaggtttgttgccgacggagtc
ttctacgctgagctcaacgaactcctcacccgcgaactcgccgaggatggttacgctggt
gttgaggttcgtaccaccccccaccgcactgaaatcatcattcgtgccaccaaaacccag
aacgttcttggagaaaagggacagcgtatccgtgagttgacctcagttgttcagaagagg
tttgactttgccgagggtgccgtggagctttacgccgagcgtgtgcagaaccgtggactc
tgtgctcaggcccaggctgagtctcttaagttcaagcttcttgctggacttgccgtccgt
cgtgcttgttacggtgtcgttcgtttcgttatggaggcatctgccaagggttgcgaggtt
atcgtttctggaaagctgagaggacagcgtgctaagggaatgaagttcggagatggttac
atgatcaagactggacatgctggacaggtttacactgacgtcgctgtgcgtcacgtactc
atgaggcaaggagttatcggaatcaaggttgctatcatgcttccccacgatcccaaggga
gttcagggacccaagattcctcttgatgatgtggtcactatccttgagccaaaggaagag
cccagtcctgagagcatcttgcaggctcagcaagctgctgaagctgctgccgccgctgcg
gctcaggctgctcttcagcaacagcttcttgcccagcagcaggctgagatggctgctgcc
ggaggtgcccctgccgttgatgctggattctaa
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