Thalassiosira pseudonana: THAPSDRAFT_28300
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Entry
THAPSDRAFT_28300 CDS
T01078
Name
(RefSeq) dimethyladenosine transferase
KO
K14191
18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:
2.1.1.183
]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_28300
Enzymes [BR:
tps01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.183 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase
THAPSDRAFT_28300
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
THAPSDRAFT_28300
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RrnaAD
Methyltransf_25
Methyltransf_11
PCMT
Methyltransf_12
Methyltransf_4
MTS
Methyltransf_23
Methyltransf_2
Ubie_methyltran
UPF0020
Motif
Other DBs
NCBI-GeneID:
7449625
NCBI-ProteinID:
XP_002290226
JGI:
28300
UniProt:
B8C2N6
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All DBs
Position
5:959920..961372
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AA seq
335 aa
AA seq
DB search
MPKTKRPRRSDPSSASSSPYAITSRSAPSSSTSNNEGAASLKSAGTNLIAPNTSLGQHFL
KNPAVVTAIVAKAGLKPTDSILEIGPGTGNMTVPLLQQSKSVVAIEYDTRMVREVLKRVE
GTSEERKLKVIQGDAIKTRFPFFDVCVANVPYQISSALVFKLLSHRPMFRCAVMMFQEEF
ALRLTARPGEALYCRLSVNTQLLAKVDQLMKVGRNNFRPPPKVESRVVRIELRNPPPPVN
FTEWDGMIRLLFNRKNKTLRSVLMTKPTIKMLDENMRTQRALNGASMNTENKTADQIIED
VVAMEQWKDKRASKLDLDDFLALLAEFNKRGIHFA
NT seq
1008 nt
NT seq
+upstream
nt +downstream
nt
atgccaaagaccaaacgccctcgtagatcagacccttcgtctgcatcatcatcaccctac
gccatcacatcacgttcagcaccatcctcgtccacctccaacaatgaaggcgccgcctct
ctcaaatcggcaggaaccaacctcatcgcccctaacacctccctcggccagcactttctc
aaaaaccccgcagtagtcacagcaattgttgccaaagcaggtctcaaaccaactgattcc
atcctagaaatcggtccaggaacaggaaacatgacagtaccccttctccaacaatccaaa
tcggtcgtcgccattgaatacgatacacgcatggtacgcgaggtgctcaaacgtgtcgaa
ggcacgtccgaagaacgcaaactcaaagtaatccagggagacgctatcaaaactcgcttt
cccttctttgacgtctgtgtggccaacgtaccctatcaaatatccagtgcactcgtcttc
aaactcctttcccaccgtccaatgtttcgttgcgccgtcatgatgtttcaagaagaattt
gcattacgactcactgctcgaccgggagaagcattgtattgtagattgtcggtgaataca
caattgttggcaaaggtggatcaattgatgaaggtggggaggaataactttaggcctccg
ccgaaggtggagagtcgagttgttaggattgagttaaggaatccgccgcctcctgtgaat
tttaccgagtgggatggtatgattcgattactattcaaccgaaagaacaagacacttcga
tctgtcctcatgacgaagcccactatcaagatgttggatgaaaatatgaggactcaacgt
gctttgaatggtgcttcgatgaatacggaaaataaaactgcggatcaaataatagaagat
gtagtggcaatggagcaatggaaagacaaacgtgcgagcaagcttgatttagatgacttc
ttggcgttgcttgctgaatttaataagaggggcattcactttgcttaa
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