Thalassiosira pseudonana: THAPSDRAFT_28496
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Entry
THAPSDRAFT_28496 CDS
T01078
Symbol
AHC3
Name
(RefSeq) hypothetical protein
KO
K01251
adenosylhomocysteinase [EC:
3.13.2.1
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00270
Cysteine and methionine metabolism
tps00670
One carbon pool by folate
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09105 Amino acid metabolism
00270 Cysteine and methionine metabolism
THAPSDRAFT_28496 (AHC3)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
THAPSDRAFT_28496 (AHC3)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tps01009
]
THAPSDRAFT_28496 (AHC3)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_28496 (AHC3)
Enzymes [BR:
tps01000
]
3. Hydrolases
3.13 Acting on carbon-sulfur bonds
3.13.2 Thioether and trialkylsulfonium hydrolases
3.13.2.1 adenosylhomocysteinase
THAPSDRAFT_28496 (AHC3)
Protein phosphatases and associated proteins [BR:
tps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
THAPSDRAFT_28496 (AHC3)
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_28496 (AHC3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AdoHcyase
AdoHcyase_NAD
2-Hacid_dh_C
KARI_N
THF_DHG_CYH_C
TrkA_N
NAD_binding_7
Shikimate_DH
Motif
Other DBs
NCBI-GeneID:
7448410
NCBI-ProteinID:
XP_002290951
JGI:
28496
UniProt:
B8C553
LinkDB
All DBs
Position
6:345361..347047
Genome browser
AA seq
481 aa
AA seq
DB search
MSTGDYKVADISLADYGRKEIEIAEIEMPGLMNCVEENKASQPLAGARVSGSLHMTIQTA
VLIETLKKIGGDIRWCSCNIFSTQDHAAAAIARDESAAVFAWKGETLEEYWECTLSALTW
PEDDGKGQGPDIIVDDGGDMTLLIHEGKKAEDAFLKDGTLPDPTSTDNEEFKIVLTIIKR
LLEGGETDKWNKIASRCKGVSEETTTGVHRLYTMEKNGSLLFPAINVNDSVTKSKFDNLY
GCKHSLPDGIMRATDVMMAGKKAVICGYGDVGKGCAAAMRANGCVVYVTEIDPICALQAC
MEGFTVCTLEDVVETADIFITTTGNKGILMADVMGKMKNNAIVGNIGHFDNEIDMAGLMK
ITKRINIKPQVDRFVFENGNGIIVLAEGRLLNLGCATGHPSFVMSCSFTNQALAQIELWT
EKDSGKYATGKVYVLPKTLDEKVARLHLKSLGAKLTVLSEEQSEYIGVAVNGPYKPDTYR
Y
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
atgtctactggagattacaaagttgctgacatctctctcgccgactacggtcgcaaggag
attgaaattgccgagattgagatgcctggactcatgaactgcgtcgaggagaacaaagct
tctcagcctctcgccggagctcgtgtttctggatcccttcacatgacaatccaaactgct
gttctcattgagaccttgaaaaagatcggaggagacatccgttggtgctcatgtaacatc
ttctccactcaggatcacgctgctgccgccattgctcgtgacgagagtgctgctgtcttt
gcttggaagggagagactcttgaggagtactgggagtgcaccttgagtgccttgacttgg
cccgaggatgatggcaaaggtcagggacctgatatcattgttgacgatggtggagacatg
actcttctcatccacgagggaaagaaggccgaggatgccttcttgaaggatggaactctc
cccgatcctacctccaccgacaacgaggagttcaagatcgttcttaccatcatcaagcgt
cttcttgagggaggagagactgacaagtggaacaagattgccagtcgatgtaagggagtg
tctgaggagaccaccactggagtccaccgtttgtacaccatggagaagaacggaagtctc
ttgttccctgccatcaacgtgaacgactccgtgaccaagtccaaattcgacaacttgtac
ggatgcaagcactctcttcccgatggtatcatgcgtgccaccgacgtcatgatggctggt
aagaaggctgtcatctgcggatacggagatgttggaaagggatgtgccgctgccatgcgt
gccaacggatgcgtcgtgtacgtcactgagattgatcccatctgtgcccttcaggcctgt
atggagggattcaccgtgtgcactttggaggatgttgttgagactgctgatatcttcatc
accaccaccggaaacaagggaatcctcatggctgatgtcatgggcaagatgaagaacaat
gccatcgttggaaacattggtcacttcgacaacgagattgatatggctggtttgatgaag
atcacgaagcgtatcaacattaagccacaggtggatcgtttcgtgttcgagaacggaaac
ggaatcattgttcttgccgagggacgtcttcttaaccttggatgtgccactggacacccc
tccttcgtcatgtcttgctccttcaccaaccaggctcttgcccagattgagctttggacc
gagaaggactctggaaaatacgctaccggaaaggtgtacgttcttcccaagactttggac
gagaaggttgcccgtcttcacttgaagagtcttggagccaagcttactgtcttgtccgag
gagcaatccgagtacattggagttgcagtgaacggaccttacaagcctgatacctaccgt
tattag
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