Thalassiosira pseudonana: THAPSDRAFT_28825
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Entry
THAPSDRAFT_28825 CDS
T01078
Name
(RefSeq) predicted protein
KO
K00698
chitin synthase [EC:
2.4.1.16
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00520
Amino sugar and nucleotide sugar metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
THAPSDRAFT_28825
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
tps01003
]
THAPSDRAFT_28825
Enzymes [BR:
tps01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.1 Hexosyltransferases
2.4.1.16 chitin synthase
THAPSDRAFT_28825
Glycosyltransferases [BR:
tps01003
]
Polysaccharide
Structural polysaccharide
THAPSDRAFT_28825
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Chitin_synth_2
Cyt-b5
Glyco_trans_2_3
Glyco_tranf_2_3
Glycos_transf_2
NICE-3
Motif
Other DBs
NCBI-GeneID:
7446358
NCBI-ProteinID:
XP_002291658
JGI:
28825
UniProt:
B8C4Q2
LinkDB
All DBs
Position
6:complement(1928272..1931188)
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AA seq
869 aa
AA seq
DB search
MLFCSACFIGISGVVPMFLCRETTVFTVDEIQARDRTEDWTVIFGTIYDIKSYISLHPGG
DQITSIIGKDASKYFPRRPVGLLPDSCMNPEVELTTEAVCEEFDEVDLLMNMHCHSAVGF
SGIKRSFGEYERGILAHRASNLKNDPHTDYVMIYNRIYNVTRYIDGITNERTREIEADSE
NAYLNEDLTSLIINKRGQDATAVYEALYRDDVALSCLDDLFYIGVLDEPEDILCRVLNYA
MYAIMIAIAGVLAVQCLCSLIYLVRMKRTITRDDTRTKVIVMVPCYNEGDKELRKTIDSV
MDTSYPDDNKVLFVVADGNITGKGERKSTPETLSQILGYNINSNDKSYKCKSIGDLTENR
AKLYYGTYKDCGKELKYIVIVKCGVASEKGSPRAGNRGKRDSQLLFTGLLNRFHHGRKLN
DLDNGIKNALDHLQMPLDEVRYLMAIDADTRIDRESISHMTYSMNKNDSVLALCGETKVD
NKAQSWVTMIQVFEYYTNHHMKKAFESVFGCVTCLPGCFTMYRLFSDDGRPLLSCDDVYQ
RYATNNVKTLHEKNLYHLGEDRMLTTLLLRYFPDMKLSFVPEATCYTIVPHTFSVLLSQR
RRWINSTFHNMLELVRVNTMCGVCCFSMKSIVILDLVATLILPASLIYVGYIVYITFWMG
EPLSLLMLVVWGIVVGVQVVVFLLRSRWDYWWWFLVFILLGVPVFYFILPIYSFWHMDDF
SWGATRQVSGQAAVTSSKSKDDTICSDRNSPMGFEVTADEHAKTAHRNAAAAQKQRAPSA
PLRSKPPRHTSSLYQTSTPIDVDEEGGRYSASHNAAHRYGESNPVDLDAVSVDNFTLEAS
VNTKTTFDPEKYSDEEEAKRIRRLRRAAC
NT seq
2610 nt
NT seq
+upstream
nt +downstream
nt
atgttgttctgtagcgcttgttttattgggattagtggtgtggtgcccatgtttctgtgt
cgggagaccacggtatttactgtggacgaaattcaagccagagaccgtaccgaggactgg
acagtcatctttggtaccatctacgatatcaaatcttacatttctctccatccaggagga
gatcaaatcacctccatcattggaaaggatgcatcaaagtacttcccccgtagacccgtt
ggactacttcccgacagttgcatgaatccagaagtagagttgaccacagaggctgtgtgt
gaggaatttgacgaggtagatctgttgatgaacatgcattgtcactctgcggtaggattc
tcaggtatcaagaggtcgtttggggagtatgagcgtggaatactggctcatcgagcgtca
aacttgaagaatgatcctcatactgactatgtcatgatatacaaccgcatctacaatgtg
acgaggtatattgatgggatcacaaatgaacgaacgagggagattgaggcagatagcgag
aatgcttatttgaacgaggatttgactagtttgattattaacaagaggggtcaggatgct
actgcggtgtatgaagcgttgtatcgagatgatgtggcgttgtcatgcttggatgacttg
ttttacatcggtgtactggacgaaccggaggacatcctctgccgagtcctcaattacgcc
atgtacgccatcatgattgcaattgctggagtactcgccgttcagtgcctatgctctctc
atctacctcgttaggatgaaacgaaccatcactcgcgacgatactcgaaccaaagtgatt
gtaatggtaccttgctacaacgaaggcgacaaagagcttcgcaagaccattgactctgtg
atggatacctcatatcccgatgacaataaagtgttatttgttgttgcagatggaaatatc
acaggtaaaggtgaacgcaagagcactcccgagacattgtcgcagattcttggttacaat
atcaactccaatgacaagtcgtacaaatgtaagagtatcggcgatctcaccgagaataga
gccaagctttactacggaacgtacaaggactgtggcaaggagttgaagtacatcgttatt
gtcaagtgtggtgttgcgagtgaaaagggatcacctcgtgctggtaatcgtggcaagcga
gactctcagctactcttcaccggtttgctcaaccgttttcatcacggtaggaagctcaat
gacttggataatggaatcaagaacgcactggatcatctacagatgccgttagatgaggtg
aggtatctcatggctatcgacgctgatactcgtatcgacagagagagtataagtcatatg
acctactcgatgaacaagaacgacagtgtgttggctctgtgtggagagaccaaggtcgac
aacaaggctcaatcgtgggttacaatgattcaggtcttcgagtactacaccaatcatcac
atgaagaaggcctttgaatctgtctttggctgcgtcacatgtctccccggctgtttcacc
atgtatcgtctctttagtgatgacggccgtccacttctctcgtgcgacgatgtctaccag
cgttatgcaacaaacaatgtcaagacgctgcatgaaaagaatctgtatcacttgggagaa
gaccgcatgttaacgacactcttgctgaggtactttccggatatgaagctatccttcgta
ccagaagcaacgtgctacaccatcgtacctcatacgttcagtgtgctgctatctcagcgt
cgtcgttggatcaactccacctttcacaacatgctggagcttgtgagagtcaatactatg
tgtggagtctgctgcttttcgatgaagagtatcgttatcttggatctagtagctaccttg
attctaccggcctctctcatttacgttggatacattgtctacattacgttttggatggga
gagcctctttcgttgctgatgttggtcgtctggggaatcgtggtcggtgtccaggttgtg
gtatttcttctgcgatcgcgctgggattactggtggtggttcttggtcttcatacttttg
ggcgtccccgtcttttacttcattcttccgatatactcgttttggcatatggacgacttt
agctggggtgcgactaggcaggtaagcggacaagctgcagtgacttcttcgaaaagcaaa
gacgatactatttgctcggacagaaactcgcccatgggatttgaggtcacggcagacgag
catgctaagacagcacatcgaaatgcggctgctgctcagaagcaaagagctccgtctgct
ccgttacgatccaagccacccagacacacgtcgtctctctaccaaacttctacaccaatc
gacgtcgacgaagaaggtggaaggtatagcgcctcacacaacgcagctcatcgttacggg
gaatcaaatccggttgacttggacgctgttagtgtagacaactttactttggaagcatcg
gtgaataccaagactacgtttgatcctgaaaagtacagcgacgaggaggaggcaaagaga
atacgacgattgagaagagctgcatgctaa
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