Thalassiosira pseudonana: THAPSDRAFT_29228 Help Entry THAPSDRAFT_29228  CDS       T01078                                  Symbol GcpE Name (RefSeq) gcpe-like protein   KO K03526   (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase [EC:1.17.7.1 1.17.7.3] Organism tps  Thalassiosira pseudonana Pathway tps00900   Terpenoid backbone biosynthesis tps01100   Metabolic pathways tps01110   Biosynthesis of secondary metabolites Module tps_M00096   C5 isoprenoid biosynthesis, non-mevalonate pathway Brite KEGG Orthology (KO) [BR:tps00001]  09100 Metabolism   09109 Metabolism of terpenoids and polyketides    00900 Terpenoid backbone biosynthesis     THAPSDRAFT_29228 (GcpE) Enzymes [BR:tps01000]  1. Oxidoreductases   1.17  Acting on CH or CH2 groups    1.17.7  With an iron-sulfur protein as acceptor     1.17.7.1  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (ferredoxin)      THAPSDRAFT_29228 (GcpE)     1.17.7.3  (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase (flavodoxin)      THAPSDRAFT_29228 (GcpE) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  GcpE Zn_ribbon_9 DUF7575 Motif Other DBs NCBI-GeneID:  7452877 NCBI-ProteinID:  XP_002292108 JGI:  29228 UniProt:  B8C7D5 LinkDB All DBs Position 8:complement(998620..1001699) Genome browser AA seq 686 aa AA seqDB search MTKYCEDLYSVTRRKTRTVTCGPIQFGSDHPIVRQTMATTDTANVDASIEQIMRCADKGF DLIRITVQGKREANAAAKIREGLFKKGYDIPLCADMHFQPVVAQLVADAVEKIRINPGNF ADGRKDFEEKVYESEADYVKEREYLVEAMLPLVQKCKDLNRCMRIGTNHGSLSSRVLSYY GDTPRGMVESALEFADICRSQDYHNFVFSMKASNPLVMVQSYRLLASEMYRLDWDYPLHL GVTEAGEGEDGRMKSAVGIGTLLADGLGDTVRVSLTEDPEFEYEPCNRLSEMAEGRLAAT NPEAAARQSAVKKYVDTRDITTYSRRVGTLPTKKEGEKVDVEQFLNPNGSVISYISPKML SEGNAPYLYKELGFKTAVGMPFKDIATSDSVFMRELPATDDSNARTALRRMMEVGTGVIV PAEELKENPLENAVALVSLTEAVKSNGEIPEGAIRLAVEIDGSEDDDTIAKVKDLDPVMI FIAIDEELSQLHASRRIFEILKTNEINVPAIHHYKSSVADSNDLALELGTKIGSLLTDGN GDGILIEQVGETNFSVEFLRNTGFSLLQGCRMRNTKTEFVSCPSCGRTLFDLQETTAKIT EATGHLPGVTVAVMGCIVNGPGEMADADFGYVGTLPGKVDLYYGKEVVRKNIPNDDAVES LVELIKEYGMWKEKEVEEEVEEAVAA NT seq 2061 nt NT seq  +upstreamnt  +downstreamnt atgacgaagtattgcgaggacttgtactctgtcactcgtcgtaaaacgcgtactgtgacg tgtggtcctattcaatttggttctgatcatcccatcgttcgccagactatggctactacc gacactgccaatgttgatgcatcaatcgagcaaatcatgcgttgtgctgacaagggcttc gacttgatccgcatcaccgtgcaaggaaagcgtgaggccaatgctgcagctaagatccgt gagggtctgttcaaaaagggatatgatattcctctttgcgccgatatgcatttccaacct gttgttgctcagttggtagcagatgctgtggagaaaattcgtatcaaccctggaaacttt gcggatggaaggaaggacttcgaggagaaggtttatgaatcggaggctgattacgtcaaa gaacgtgaatatctcgtagaggcaatgcttcctttggttcagaaatgcaaagatctcaac cgttgcatgcgtatcggaacaaaccacggatctctttcctcccgagtcttgtcttattat ggagatactcctcgtggtatggttgagtcggctcttgagttcgctgacatttgccgcagc caggactatcacaactttgttttctcgatgaaggcaagcaaccctcttgttatggtgcaa agttatcgcttgcttgcgtctgaaatgtaccgtcttgactgggactaccctcttcatctt ggagtgactgaggccggagaaggagaagatggcagaatgaagtcagcagtgggcattggt actcttctcgcggatggtctcggtgacactgtacgtgtatctttgacggaggatcctgag tttgagtacgagccatgcaaccgtcttagtgaaatggccgaaggacgcctcgcggctacg aacccagaggctgctgctcgccaatctgctgtgaagaagtacgtggatactcgtgacatc acaacttattcacgaagggtgggcactctgcctacaaagaaggagggagaaaaggttgat gttgagcaattcttgaaccccaatggttccgtcatcagttacatctctcccaagatgctt tctgagggtaatgctccttatctctacaaagagcttggattcaagactgctgttggtatg ccatttaaagatattgccacatcggactccgtcttcatgagggaacttccagcaaccgat gattccaatgcgaggactgctcttcgacgaatgatggaggttggaacaggtgttattgtc ccagctgaggagctaaaggagaatccattggagaatgccgttgctcttgtcagcctcact gaagctgtcaaatcgaacggagagattcccgagggtgccatccgtcttgctgtggagatc gatggaagcgaggacgatgataccattgccaaagtgaaggacctcgatccggttatgatc tttatcgctattgatgaggaactttcccaactgcatgcctctcgtcgtatctttgaaatc ttgaagacaaatgaaatcaatgtccctgcaatccaccactacaaatcatctgttgctgac tctaacgatctcgctttggagcttggaaccaaaatagggtccttgcttaccgatggaaat ggagatggaatcttgattgagcaggttggagagacaaacttcagcgttgagttcctccgt aacactggattctctcttcttcagggatgccgtatgcgcaacaccaagacggagttcgta tcttgtccatcctgtggacgaacactctttgacttgcaggagaccactgctaagatcacg gaagcaacgggccatttgccaggagtgaccgtggctgttatgggttgcatcgtgaacgga ccgggagagatggccgatgctgattttggatacgttggaaccttgcctggtaaggtagac ttgtattacggcaaggaggttgtccgcaagaacatccccaacgatgatgctgtcgaatct ttggtggaattgattaaggagtacggaatgtggaaagaaaaggaggtcgaggaagaggta gaagaggctgttgctgcttaa

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