Thalassiosira pseudonana: THAPSDRAFT_29304
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Entry
THAPSDRAFT_29304 CDS
T01078
Symbol
TUB1
Name
(RefSeq) tubulin alpha
KO
K07374
tubulin alpha
Organism
tps
Thalassiosira pseudonana
Pathway
tps04145
Phagosome
tps04517
IgSF CAM signaling
tps04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04517 IgSF CAM signaling
THAPSDRAFT_29304 (TUB1)
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
THAPSDRAFT_29304 (TUB1)
09142 Cell motility
04814 Motor proteins
THAPSDRAFT_29304 (TUB1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
tps03019
]
THAPSDRAFT_29304 (TUB1)
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_29304 (TUB1)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_29304 (TUB1)
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_29304 (TUB1)
Messenger RNA biogenesis [BR:
tps03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
THAPSDRAFT_29304 (TUB1)
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
THAPSDRAFT_29304 (TUB1)
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
THAPSDRAFT_29304 (TUB1)
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
THAPSDRAFT_29304 (TUB1)
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_29304 (TUB1)
Exosomal proteins of colorectal cancer cells
THAPSDRAFT_29304 (TUB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Tubulin_3
DUF7281
DUF5008
Motif
Other DBs
NCBI-GeneID:
7443528
NCBI-ProteinID:
XP_002292237
JGI:
29304
UniProt:
B8C832
LinkDB
All DBs
Position
9:428470..430695
Genome browser
AA seq
452 aa
AA seq
DB search
MRECISIHMGQAGIQTGNGCWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
HVPRAVYVDLEPTVCDEVRSGTYRQLYHPEQIISGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADNCTGLQGFLVFHATGGGTGSGLGSLLLERLSVDYGRKSKLSFAVSPSPQVSTA
VVEPYNSVLSTHALLEHTDCTFCLDNEALYDVCRRNLDIERPTYTNLNRLIAQVISSLTA
SLRFDGALNVDVTEFQTNLVPYPRIHFMLTSYAPVISAEKAYHEQLSVAEITNSVFEPAG
MMTKCDPRHGKYMACCLMYRGDVVPKDVNAAVATIKTKRTIQFVDWCPTGFKCGINYQPP
TVVPGGDLARVQRAVCMVANTTAIAEALSRIDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGAETAEGEGEEDFDEEY
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgcgtgaatgtatctccatccacatgggccaggccggtatccaaaccggtaacggctgc
tgggaactctactgcctcgagcacggcatccaacccgatggccaaatgcccagcgacaag
actgtcggaggcggagacgacgccttcaacaccttcttctcagagacgggtgccggaaag
cacgtcccccgtgccgtgtacgtggatttggagcccaccgtgtgcgacgaagtaaggagc
ggaacgtaccgtcagctgtaccaccctgagcagattattagtggaaaggaggatgctgcc
aacaactatgctcgtgggcattacactattggaaaggaaatcgttgaccttgtcctcgac
aggatccgcaagttggccgacaactgtaccggactccaaggtttcctcgtcttccacgcc
accggaggaggaaccggatctggtctcggatccctcctcctcgagcgtctctcggttgac
tatggacgcaagtccaagctctccttcgccgtgtcaccttctcctcaggtgtccaccgcc
gtggtcgagccttacaactccgtgttgtctacccatgctcttctcgagcacacggactgt
accttctgtcttgacaacgaggctctctacgatgtgtgccgtcgtaacctcgacattgag
cgtcccacatacaccaacctcaacaggttgattgctcaggtcatctcttccttgacggcc
tctcttcgtttcgacggagccttgaacgtggatgttaccgagttccagaccaacttggtg
ccctaccctcgtatccatttcatgcttacgtcctacgcacccgtcatctctgccgagaag
gcctaccacgagcagctatcggttgctgagatcaccaactctgtctttgagcctgccggc
atgatgaccaagtgtgatcctcgtcacggaaagtacatggcttgctgtctcatgtaccgt
ggagacgttgtccccaaggatgtcaacgctgctgttgccaccatcaagaccaagaggacc
attcagtttgttgactggtgccctactggattcaagtgcggtatcaactaccaacctcca
accgtcgtgcccggaggagatctcgctcgtgttcagcgtgccgtgtgcatggttgccaac
accaccgccattgccgaggctctctctcgtatcgaccacaagttcgatctcatgtacgcc
aagcgtgcctttgtgcactggtatgtcggagaaggaatggaggagggtgaattctctgag
gctcgtgaggatcttgctgctcttgagaaggactacgaagaggttggagccgagactgct
gaaggcgagggcgaggaggattttgatgaggagtattaa
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