Thalassiosira pseudonana: THAPSDRAFT_2942
Help
Entry
THAPSDRAFT_2942 CDS
T01078
Name
(RefSeq) predicted protein
Organism
tps
Thalassiosira pseudonana
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-GeneID:
7450448
NCBI-ProteinID:
XP_002287545
JGI:
2942
UniProt:
B8BVS9
LinkDB
All DBs
Position
2:2282826..2293387
Genome browser
AA seq
1964 aa
AA seq
DB search
MHGRPRVSINSPIFFTHLLFSNLIFTFHSSCTTKPSSAPSDSPSASGAPSSQPSDSPSSS
GQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPT
SMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPS
DSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSLGQPTSMPSDSPS
LSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGK
PSSAPSGSPSRSVEPLSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSA
PSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSSSLSGKPSSAPSGS
PSRSVEPLSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRS
VEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPS
SAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPS
DSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPS
ASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGA
PSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQ
PSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDS
PSSSGQPTSMPSDSPSSSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSS
GQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPT
SMPSDSSSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPS
DSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPS
SSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGK
PSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSSSGKPSSA
PSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGS
PSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRS
VEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPS
SAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPS
DSPSASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPS
ASGAPSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGA
PSSQPSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQ
PSDSPSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDS
PSSSGQPTSMPSDSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSDSGAPSSQPSDSPSSS
GQPTSMPSDSSSLSGKPSSAPSGSPSRSVEPSSAPSDSPSDSGAPSSQPSDSPSSSGQPT
SMPSDSSSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPS
DSPSLSGKPSSAPSGSPSRSVEPSSAPSDSPSASGAPSSQPSDSPSSSGQPTSMPSDSPS
LSGKPSSAPSGSPSHSVEPPPTAIPSTLHPTKVPTVRPFFVVVL
NT seq
5895 nt
NT seq
+upstream
nt +downstream
nt
atgcatggccgtccacgtgtctcgatcaattcacctatcttcttcactcacctcctcttc
tctaatctaatcttcactttccactcctcgtgtaccacaaagccgtcgtctgctccaagt
gacagcccgtctgcctctggagctccatcatcgcagccttccgactcaccgagctcatca
ggacaaccaacgtctatgccctcagactcgccatcgttgtctggcaaaccaagcagtgct
ccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtct
gcctctggagctccatcatcgcagccttccgactcaccgagctcatcaggacaaccaacg
tctatgccctcagactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcg
cccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagct
ccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacgtcaatgccctca
gactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagt
gtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagctccatcatcgcag
ccttccgactcaccgagctcattaggacaaccaacgtctatgccctcagactcgccatcg
ttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcg
tctgctccaagtgacagcccgtctgcctctggagctccatcatcgcagccttccgactca
ccgagctcatcaggacaaccaacgtctatgccctcagactcgccatcgttgtctggcaaa
ccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgttgtctgctccaagt
gacagcccgtctgcctctggagctccatcatcgcagccttccgactcaccgagctcatca
gggcaaccaacgtcaatgccctcagactcgccatcgttgtctggcaaaccaagcagtgct
ccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtct
gcctctggagctccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacg
tcaatgccctcagactcgtcatcgttgtctggcaaaccaagcagtgctccgtccggatcg
cccagtcgtagtgtagagccgttgtctgctccaagtgacagcccgtctgcctctggagct
ccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacgtcaatgccctca
gactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagt
gtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagctccatcatcgcag
ccttccgactcaccgagctcatcagggcaaccaacgtcaatgccctcagactcgccatcg
ttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcg
tctgctccaagtgacagcccgtctgcctctggagctccatcatcgcagccttccgactca
ccgagctcatcagggcaaccaacgtctatgccctcagactcgccatcgttgtctggcaaa
ccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagt
gacagcccgtctgcctctggagctccatcatcgcagccttccgactcaccgagctcatca
gggcaaccaacgtctatgccctcagactcgccatcgttgtctggcaaaccaagcagtgct
ccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtct
gcctctggagctccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacg
tcaatgccctcagactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcg
cccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagct
ccatcatcgcagccttccgactcaccgagctcatcaggacaaccaacgtctatgccctca
gactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagt
gtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagctccatcatcgcag
ccttccgactcaccgagctcatcagggcaaccaacgtcaatgccctcagactcgccatcg
ttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcg
tctgctccaagtgacagcccgtctgcctctggagctccatcatcgcagccttccgactca
ccgagctcatcaggacaaccaacgtctatgccctcagactcgccatcgtcgtctggcaaa
ccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagt
gacagcccgtctgcctctggagctccatcatcgcagccttccgactcaccgagctcatca
gggcaaccaacgtctatgccctcagactcgccatcgttgtctggcaaaccaagcagtgct
ccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtct
gcctctggagctccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacg
tctatgccctcagactcgtcatcgttgtctggcaaaccaagcagtgctccgtccggatcg
cccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagct
ccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacgtcaatgccctca
gactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagt
gtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagctccatcatcgcag
ccttccgactcaccgagctcatcaggacaaccaacgtctatgccctcagactcgccatcg
tcgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcg
tctgctccaagtgacagcccgtctgcctctggagctccatcatcgcagccttccgactca
ccgagctcatcagggcaaccaacgtcaatgccctcagactcgccatcgttgtctggcaaa
ccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagt
gacagcccgtctgcctctggagctccatcatcgcagccttccgactcaccgagctcatca
ggacaaccaacgtcaatgccctcagactcgccatcgtcgtctggcaaaccaagcagtgct
ccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtct
gcctctggagctccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacg
tctatgccctcagactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcg
cccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagct
ccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacgtcaatgccctca
gactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagt
gtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagctccatcatcgcag
ccttccgactcaccgagctcatcagggcaaccaacgtctatgccctcagactcgccatcg
ttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcg
tctgctccaagtgacagcccgtctgcctctggagctccatcatcgcagccttccgactca
ccgagctcatcagggcaaccaacgtcaatgccctcagactcgccatcgttgtctggcaaa
ccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagt
gacagcccgtctgcctctggagctccatcatcgcagccttccgactcaccgagctcatca
ggacaaccaacgtcaatgccctcagactcgccatcgttgtctggcaaaccaagcagtgct
ccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtct
gcctctggagctccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacg
tcaatgccctcagactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcg
cccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagct
ccatcatcgcagccttccgactcaccgagctcatcaggacaaccaacgtctatgccctca
gactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagt
gtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagctccatcatcgcag
ccttccgactcaccgagctcatcagggcaaccaacgtcaatgccctcagactcgccatcg
ttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcg
tctgctccaagtgacagcccgtctgcctctggagctccatcatcgcagccttccgactca
ccgagctcatcaggacaaccaacgtctatgccctcagactcgccatcgttgtctggcaaa
ccaagcagtgctccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagt
gacagcccgtctgactctggagctccatcatcgcagccttccgactcaccgagctcatca
gggcaaccaacgtctatgccctcagactcgtcatcgttgtctggcaaaccaagcagtgct
ccgtccggatcgcccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtct
gactctggagctccatcatcgcagccttccgactcaccgagctcatcagggcaaccaacg
tctatgccctcagactcgtcatcgttgtctggcaaaccaagcagtgctccgtccggatcg
cccagtcgtagtgtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagct
ccatcatcgcagccttccgactcaccgagctcatcaggacaaccaacgtctatgccctca
gactcgccatcgttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcgtagt
gtagagccgtcgtctgctccaagtgacagcccgtctgcctctggagctccatcatcgcag
ccttccgactcaccgagctcatcagggcaaccaacgtctatgccctcagactcgccatcg
ttgtctggcaaaccaagcagtgctccgtccggatcgcccagtcatagtgtagagcctcct
ccgacggcaattccaagtactcttcaccccactaaggtaccaactgtaagaccttttttt
gttgtcgttttgtaa
DBGET
integrated database retrieval system