Thalassiosira pseudonana: THAPSDRAFT_29705
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Entry
THAPSDRAFT_29705 CDS
T01078
Name
(RefSeq) predicted protein
KO
K11108
RNA 3'-terminal phosphate cyclase-like protein
Organism
tps
Thalassiosira pseudonana
Pathway
tps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THAPSDRAFT_29705
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_29705
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
90S particles
Other 90S particles
THAPSDRAFT_29705
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RTC
RTC_insert
Motif
Other DBs
NCBI-GeneID:
7445805
NCBI-ProteinID:
XP_002293174
JGI:
29705
UniProt:
B8CA80
LinkDB
All DBs
Position
12:complement(405136..406764)
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AA seq
408 aa
AA seq
DB search
MTNPPDSTTTKSRTLKYTDGATQFRLRLITSLLSHRPLLLRNIRSDDIDSPGLHEHEASF
LRLLDRMTNGTKIEINATGTQLRFKPGVLLGGSVEHACPVGAGGSRGVGWFLEGIMPLAA
FGKEPLELTLTGITDGTSDVDPSVDYLSSSFLPLCIKFGIGANDDYPPPSIRVSRRGAAP
LGGGVVHFYCPIVKELNPIELVEFGKVKRVRGTAISCRIPPSSAARVAHSAKGVMHRLLP
DVWIHTDVHSSSGKKDGSGGGCGQSPGLSVILSATTTEGVCLTAECSMNHNCDDESQNNQ
YNQPIERKKMELPEDLGKRSATLLLHEIFCGGCIDTSAQSFALLLMCLTPEDVSRIRLGP
FSQYTVVALRLFKEAFGVEFKLRKLGGRKTVVCSCLGIGYKNMARAST
NT seq
1227 nt
NT seq
+upstream
nt +downstream
nt
atgaccaacccaccagactccacaaccaccaaatcacgaaccctcaaatacaccgacgga
gcaacccaattccgtctgcgtctcataacctccctcctctcccatcgtcctctcctcctc
cgcaacattcgcagcgatgatatagactcacccggattacacgagcacgaggcctccttt
ctacgattgttggatagaatgaccaatggtacaaagattgagatcaatgctactggcaca
cagttgaggtttaagccgggtgtgttgctgggagggagtgtggagcatgcgtgtcctgtt
ggcgctgggggtagtaggggagttggatggtttttggaggggattatgccattggctgcg
tttgggaaggagccgttggagttgacattgacggggattacggatggtacttcggacgtt
gatccgagtgtggattatctatcgtcgagttttctacccttgtgtatcaagtttggtatt
ggtgcgaatgatgattatccacctccttctattcgtgtgtcaagaaggggagctgcgccg
ttgggtggaggagtagtgcacttttattgtcctattgtgaaggagttgaatccaattgag
ttggtggagtttggaaaagtgaagcgagtacgaggtactgccatcagttgtcgtatccct
ccatcgagtgctgcacgtgttgctcattctgcaaagggtgttatgcacagattgctaccg
gatgtgtggattcataccgatgttcattcttcgagtggaaagaaagatggtagtggaggt
ggatgcggtcaaagtccaggattgagtgtaattctttcagctacaaccactgaaggtgta
tgtctcaccgccgaatgcagtatgaaccacaattgcgacgacgaatcacaaaacaatcaa
tacaatcagccaatagagcggaaaaagatggaactccctgaagacctcgggaaaagatct
gccacgcttctgttgcacgagatattctgcggtgggtgcatcgatacaagtgctcaatca
tttgcactgctcttgatgtgtctaactcccgaagacgtgagtagaatacgcttgggtcca
ttttctcagtataccgttgtggcattgaggttgttcaaagaagcatttggggtagagttc
aagttgagaaagttgggtggtaggaagactgttgtttgtagttgtttgggtattggatat
aagaatatggcaagggccagtacttaa
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