Thalassiosira pseudonana: THAPSDRAFT_29818
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Entry
THAPSDRAFT_29818 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K06158
ATP-binding cassette, subfamily F, member 3
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03012 Translation factors [BR:
tps03012
]
THAPSDRAFT_29818
Translation factors [BR:
tps03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
THAPSDRAFT_29818
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_tran_Xtn
AAA_21
SMC_N
AAA_29
AAA_23
AAA_15
RsgA_GTPase
AAA_16
AAA
AAA_22
MMR_HSR1
NACHT
DUF87
AAA_18
DUF5906
NB-ARC
DO-GTPase2
NPHP3_N
KAP_NTPase
TerB
Thymidylate_kin
Motif
Other DBs
NCBI-GeneID:
7453005
NCBI-ProteinID:
XP_002293531
JGI:
29818
UniProt:
B8CB70
LinkDB
All DBs
Position
13:complement(300729..303388)
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AA seq
614 aa
AA seq
DB search
MTNQQRDAHETTVSAKDKRKARKELEQARREYEAKVAFLESQEEGEAGKASVSSMVLPDY
RSGRNERDIHVRNVSLSLDNGTSLLDDGELKFAHQRRYGLVGKNGVGKTTLLKAIAAFEV
EGMPRHHRILHVRQEIRAAGGDISVLQAVMDADVERNTLIEEERNADGNDADASFNADLK
RLDEVYERLQILGSDSAEGRASTILSGLQFTPSMQSGPTSALSGGWRMRVALAAALFIEP
DLLMLDEPTNHLDLEAVLWLESYLQSYRHTLIVVSHDRSFLNEVCTDTIEFKNRKLNYYK
GDYDTYVRTSEENVKNLMRVYQAYQDKREHMMEFITKFRASANRAKLVQSRVKAVEKMDS
PEPVTIEPVWTFSIPNPEPLGRPIISIDDVWFDYNAPKDEWILQQVNFGVDLDSRIGILG
PNGAGKSTLLNLIMDRLTPNKGSISRNGNLRIGHFTQHSADKFDLHLSAVENMLNLFSEA
EDQAMRSFLGRFQIQGSDALKPMMMLSGGQKSRVAFASLAYQKPHVIVMDEPTNHLDMES
IDALVGAVKDFRGGLIVVSHDQFFITNTCGELWVVGEGKTTRFRGDFNEYKKETLERTAK
RVADSVKSLSMINN
NT seq
1845 nt
NT seq
+upstream
nt +downstream
nt
atgacgaatcaacaacgcgacgctcatgaaactaccgtctcagcgaaagataaacgaaag
gcacggaaagagttggaacaagctaggagagagtatgaagccaaggtggcatttttggag
agtcaggaggagggagaggcgggtaaggcgagtgttagcagtatggtgttgcctgattat
agatcggggaggaatgagagggacattcatgttaggaatgtgtcgttgagtttggacaat
ggtacttcgttgttggatgatggagagttgaagtttgcacatcaaaggaggtatggacta
gtggggaagaatggtgtcgggaaaacaaccttgctcaaggccattgcagcatttgaagtt
gagggaatgccccgtcaccatcgcatcttgcacgtgaggcaggaaattcgtgcggcgggg
ggagacattagtgtgttgcaggcagtgatggatgccgacgtggaacgcaacactttgatt
gaagaggaaaggaatgccgatgggaacgatgccgatgcttcattcaatgctgatctgaaa
cgattggacgaagtgtacgaaagattgcagattcttgggtcagattctgcagaggggaga
gcttctaccatcttgtctggattacaattcactccgtctatgcagagtggacctacgtcg
gcattgtctggggggtggaggatgcgagtggcgctggcagcggcgcttttcatcgagccg
gatttgctgatgcttgatgagcccactaatcacttggacttggaggctgtattgtggttg
gaaagctatttgcagtcttatcggcatacattgatcgtagtcagtcatgacagatctttc
ttgaacgaagtctgcacagatactattgagtttaagaacagaaagctcaactactacaaa
ggtgactatgacacttacgtgagaacatccgaggagaatgtaaagaacttgatgagagtg
tatcaagcctatcaggacaaacgagagcatatgatggagttcattacaaagttcagggca
agtgctaacagagcgaagctggtacaaagtagggtgaaagcagtagaaaaaatggattca
cccgagcctgtaacaattgagcctgtctggacattctcaattcccaacccagagcctctt
ggccgtcccatcatatcgattgacgacgtttggttcgactataatgcgccaaaggacgag
tggattttgcagcaagttaactttggagttgatctagactctcgcattggaattctcgga
cctaatggtgccggaaaaagtacgctgctgaatctgattatggaccggctgactccaaac
aaaggatctatatcacgcaacggcaatcttcgtatcggtcacttcacacaacactctgca
gacaagtttgatttgcacctttcggctgtggagaacatgctcaatcttttttccgaagcg
gaagatcaggcaatgcgctcgttcttggggagatttcagattcaaggatcggatgcattg
aaaccaatgatgatgctctcgggagggcaaaagtcacgtgtagcatttgcatccttggcg
taccaaaagcctcacgtcattgtcatggacgaaccgacaaaccacttggatatggagagt
attgacgctttagtcggtgcagtcaaagactttcgtggtggtttgattgtagtcagccac
gaccaattcttcatcacgaacacctgtggagagctgtgggttgtgggcgaaggcaagaca
acacgattcaggggagacttcaacgaatacaagaaagagactttagaaaggacagcgaaa
cgagtcgcagatagtgtcaagagtttgagtatgattaacaactaa
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