KEGG   Thalassiosira pseudonana: THAPSDRAFT_29818
Entry
THAPSDRAFT_29818  CDS       T01078                                 
Name
(RefSeq) hypothetical protein
  KO
K06158  ATP-binding cassette, subfamily F, member 3
Organism
tps  Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:tps00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03012 Translation factors [BR:tps03012]
    THAPSDRAFT_29818
Translation factors [BR:tps03012]
 Eukaryotic type
  Initiation factors
   Initiation associated factors
    THAPSDRAFT_29818
SSDB
Motif
Pfam: ABC_tran ABC_tran_Xtn AAA_21 SMC_N AAA_29 AAA_23 AAA_15 RsgA_GTPase AAA_16 AAA AAA_22 MMR_HSR1 NACHT DUF87 AAA_18 DUF5906 NB-ARC DO-GTPase2 NPHP3_N KAP_NTPase TerB Thymidylate_kin
Other DBs
NCBI-GeneID: 7453005
NCBI-ProteinID: XP_002293531
JGI: 29818
UniProt: B8CB70
LinkDB
Position
13:complement(300729..303388)
AA seq 614 aa
MTNQQRDAHETTVSAKDKRKARKELEQARREYEAKVAFLESQEEGEAGKASVSSMVLPDY
RSGRNERDIHVRNVSLSLDNGTSLLDDGELKFAHQRRYGLVGKNGVGKTTLLKAIAAFEV
EGMPRHHRILHVRQEIRAAGGDISVLQAVMDADVERNTLIEEERNADGNDADASFNADLK
RLDEVYERLQILGSDSAEGRASTILSGLQFTPSMQSGPTSALSGGWRMRVALAAALFIEP
DLLMLDEPTNHLDLEAVLWLESYLQSYRHTLIVVSHDRSFLNEVCTDTIEFKNRKLNYYK
GDYDTYVRTSEENVKNLMRVYQAYQDKREHMMEFITKFRASANRAKLVQSRVKAVEKMDS
PEPVTIEPVWTFSIPNPEPLGRPIISIDDVWFDYNAPKDEWILQQVNFGVDLDSRIGILG
PNGAGKSTLLNLIMDRLTPNKGSISRNGNLRIGHFTQHSADKFDLHLSAVENMLNLFSEA
EDQAMRSFLGRFQIQGSDALKPMMMLSGGQKSRVAFASLAYQKPHVIVMDEPTNHLDMES
IDALVGAVKDFRGGLIVVSHDQFFITNTCGELWVVGEGKTTRFRGDFNEYKKETLERTAK
RVADSVKSLSMINN
NT seq 1845 nt   +upstreamnt  +downstreamnt
atgacgaatcaacaacgcgacgctcatgaaactaccgtctcagcgaaagataaacgaaag
gcacggaaagagttggaacaagctaggagagagtatgaagccaaggtggcatttttggag
agtcaggaggagggagaggcgggtaaggcgagtgttagcagtatggtgttgcctgattat
agatcggggaggaatgagagggacattcatgttaggaatgtgtcgttgagtttggacaat
ggtacttcgttgttggatgatggagagttgaagtttgcacatcaaaggaggtatggacta
gtggggaagaatggtgtcgggaaaacaaccttgctcaaggccattgcagcatttgaagtt
gagggaatgccccgtcaccatcgcatcttgcacgtgaggcaggaaattcgtgcggcgggg
ggagacattagtgtgttgcaggcagtgatggatgccgacgtggaacgcaacactttgatt
gaagaggaaaggaatgccgatgggaacgatgccgatgcttcattcaatgctgatctgaaa
cgattggacgaagtgtacgaaagattgcagattcttgggtcagattctgcagaggggaga
gcttctaccatcttgtctggattacaattcactccgtctatgcagagtggacctacgtcg
gcattgtctggggggtggaggatgcgagtggcgctggcagcggcgcttttcatcgagccg
gatttgctgatgcttgatgagcccactaatcacttggacttggaggctgtattgtggttg
gaaagctatttgcagtcttatcggcatacattgatcgtagtcagtcatgacagatctttc
ttgaacgaagtctgcacagatactattgagtttaagaacagaaagctcaactactacaaa
ggtgactatgacacttacgtgagaacatccgaggagaatgtaaagaacttgatgagagtg
tatcaagcctatcaggacaaacgagagcatatgatggagttcattacaaagttcagggca
agtgctaacagagcgaagctggtacaaagtagggtgaaagcagtagaaaaaatggattca
cccgagcctgtaacaattgagcctgtctggacattctcaattcccaacccagagcctctt
ggccgtcccatcatatcgattgacgacgtttggttcgactataatgcgccaaaggacgag
tggattttgcagcaagttaactttggagttgatctagactctcgcattggaattctcgga
cctaatggtgccggaaaaagtacgctgctgaatctgattatggaccggctgactccaaac
aaaggatctatatcacgcaacggcaatcttcgtatcggtcacttcacacaacactctgca
gacaagtttgatttgcacctttcggctgtggagaacatgctcaatcttttttccgaagcg
gaagatcaggcaatgcgctcgttcttggggagatttcagattcaaggatcggatgcattg
aaaccaatgatgatgctctcgggagggcaaaagtcacgtgtagcatttgcatccttggcg
taccaaaagcctcacgtcattgtcatggacgaaccgacaaaccacttggatatggagagt
attgacgctttagtcggtgcagtcaaagactttcgtggtggtttgattgtagtcagccac
gaccaattcttcatcacgaacacctgtggagagctgtgggttgtgggcgaaggcaagaca
acacgattcaggggagacttcaacgaatacaagaaagagactttagaaaggacagcgaaa
cgagtcgcagatagtgtcaagagtttgagtatgattaacaactaa

DBGET integrated database retrieval system