Thalassiosira pseudonana: THAPSDRAFT_29861
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Entry
THAPSDRAFT_29861 CDS
T01078
Name
(RefSeq) predicted protein
KO
K00264
glutamate synthase (NADH) [EC:
1.4.1.14
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00250
Alanine, aspartate and glutamate metabolism
tps00910
Nitrogen metabolism
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
tps01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
THAPSDRAFT_29861
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
THAPSDRAFT_29861
Enzymes [BR:
tps01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.1 With NAD+ or NADP+ as acceptor
1.4.1.14 glutamate synthase (NADH)
THAPSDRAFT_29861
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GATase_2
Glu_synthase
GXGXG
Glu_syn_central
Motif
Other DBs
NCBI-GeneID:
7447835
NCBI-ProteinID:
XP_002293590
JGI:
29861
UniProt:
B8CBI7
LinkDB
All DBs
Position
13:complement(602780..607999)
Genome browser
AA seq
1520 aa
AA seq
DB search
MYDSSLEKENCGVGLVASLKSVASRKVVEDANEMLIRMSHRGGVGCCPASGDGAGMLFGM
PDAFMRLKAKEALQRDLPPPNEYAVANVFFPPENADVLKDCKAIMERLTKQRGMEVIGWR
KVPVDNSMLGQDPLDSEPITEQVSLFMGPKKLSLRDFERELFRVRKMAEEEAATMLGPES
GFYINSLTSQTITYKGQLTPEQVSQYYLDIKDPQFISHLALVHSRFSTNTFPSWERAQPI
RMMCHNGEINTLRGNKNWMFSRGGLMASDYFGNDTHQLLPATSDNMSDSGNFDSVLELMA
KGSERSLPEAVMMMIPEAWQDNPNLSESKKAFYEYNSCLMEPWDGPAMVAFTDGRYIGAT
LDRNGLRPSRYYVTKDDHVVLSSEIGVIPELKDSDVKIKHRLEPGKMFLVDFETQRIVPD
DEIKEQISSLHPYGDWVQESMIDLEKWTQEAAVNTAPFDFSQSNRKLNAFGYTGERLEML
LLPMGIGGKEALGSMGNDAALAVLSEKPRQVNEYFKQLFAQVTNPPIDPIREEIVMSLVC
PVGPEGNLLADPDKQHCKRLNVRHPVLTLDEMQTLKSKVYVDKDGKKAFSSHVIDCTFPV
GSGPDGMLQALERICDEAADAIQGSIGGSGSQAVILSDRLAGPDRMSLPSLISVGAVHQH
LLRTKQRPKAAIFAEAGDCKEVHDYATIFGYGCDGVCPYMAYEALCKMNHDGLVEAKSKK
EFTDDEIMTNYRKAVAKGLLKVMSKMGISTLQSYKGAQVFEAVGLADEIVYRCFTGTTTR
IQGTDFEALYRDLERLHKIGYPENNNIGTILLQNDGQLHYRDGGEAHLNTPGGMANLQIA
ARTNSREAYKEFARLTNEQNMKVTLRGQLKFKFDPSRSVPLDDVEPVKEIVKRFATGAMS
LGSISREAHETLAKAMNAIGGRSNTGEGGEDPMRFLDDRRSSIKQVASGRFGVTSHYLAN
SDQIQIKMAQGAKPGEGGELPGFKVSEYIAENRHTTPGVGLISPPPHHDIYSIEDLAQLI
HDLKNAQPTGEVSVKLVSEVGVGVVAAGVAKALADHITISGHDGGTGAAAWTGVKGAGLP
WELGLAETQQTLVLNGLRDRVKLQTDGQLKTGRDVVIACLLGAEEFGFATGPLIAMGCIM
MRKCHLNTCPVGIATQDEELRKKFAGQPEHVMNYLFLMAEEIREIMAKLGYTKMEDMVGQ
TQHLEVNKRGLHYKSRGLDLTPLLTPASELNPTAGIRNLNTQYHGLDLAKDNVLIEKAKD
ALENGTPVVFEEDITNLNRTCGTMLSYQISKRYGKEGLPDDTIQIKMKGHAGQSFAFTLA
KGVTMTVEGDANDYTGKGLSGGKIAVYPSQEVIDDGFVSEDNVIVGNVCLYGATAGKAFF
RGKAGERFCVRNSGALAVVEGTGDHCAEYMTGGDLVVLGETGRNFGAGMSGGIAYVYDPE
GKFPERCNMGLVALEEIDTVEEKEKVFGFIQEHVAMTGSPVGQRMLENWDAEHKKFVKVF
PHDYKRVLEERAAAKKLVAA
NT seq
4563 nt
NT seq
+upstream
nt +downstream
nt
atgtatgattcttcgcttgagaaggagaattgcggtgtggggttggtcgcatcgctgaag
agcgtggcgagtaggaaggtggtggaggatgccaatgaaatgttgattaggatgagtcat
aggggcggtgtggggtgttgtcctgctagtggagatggtgctggaatgctcttcggcatg
cccgacgccttcatgcggctcaaagccaaagaagccctccaacgcgatctgcccccaccc
aacgaatatgccgtggccaacgtattcttcccccctgaaaacgccgacgtgttgaaggat
tgcaaggcgatcatggaacggttgacgaaacaacgggggatggaggtgattggctggagg
aaggttccggtggataattccatgttgggacaggatccgttggattcggagcctattact
gagcaggttagtttgttcatgggaccaaagaaactatccctccgagactttgaacgtgaa
ctctttcgcgtccgcaaaatggccgaagaagaagcagccaccatgctcggccccgaaagc
ggattctacatcaactccctcacctctcaaaccatcacgtacaagggccaactcacaccc
gagcaagtgtcgcagtactatctcgatatcaaggatcctcaattcatcagtcatctggcg
ctcgtccactctcgtttctccaccaatacctttccctcatgggaacgtgcccaacccatc
cgcatgatgtgtcacaatggagagattaacactcttcgcggaaacaaaaactggatgttc
agccgtggaggactcatggcctccgattactttggaaatgatacccatcagctcctcccc
gccacgtcggataacatgagtgattccggtaactttgatagtgtgttggagctcatggcc
aagggatcggagaggagtttgccagaggcagtcatgatgatgattccggaggcttggcag
gataatccgaatttgtccgagtcgaaaaaggcgttttatgaatacaactcgtgtttgatg
gagccttgggatgggcctgcgatggttgcttttacggatggacggtacattggagcaact
ttggataggaacggacttcgtccttctcgatactatgtgaccaaggatgatcacgttgtg
ctttcgtcggagattggtgttattccagagttgaaggattcggatgtcaaaatcaaacat
cgtcttgagcctggtaagatgttcttggtagacttcgagacccaacgcatcgttcccgat
gatgagatcaaagagcaaatctcgtcgttgcacccctacggagactgggtgcaggaatca
atgattgatttggagaagtggactcaagaagcagctgtgaacacagcgccatttgacttt
tctcagtcaaaccgcaaacttaacgcctttggatacactggagaacgtcttgaaatgctc
ctcttgcccatgggcattggaggaaaggaagctttgggaagcatgggaaatgatgctgcc
ctcgccgttctttctgagaagccacgtcaagtgaatgagtatttcaagcagttgtttgct
caggtgaccaatcctcccattgatcctattcgtgaggagattgtcatgagtctcgtgtgt
ccagtgggtcctgagggaaatctcttggctgatccggataagcagcactgcaagaggttg
aacgttcgtcatcccgtgttgacgttggatgagatgcagacgttgaagagcaaggtttac
gttgacaaggatggaaagaaggcattctcgtctcatgtaattgattgcacgttccctgtt
ggttctggacccgacggcatgcttcaggcactcgagagaatctgtgatgaggctgccgat
gccatccaaggaagtatcggtggaagtggatctcaagctgtgattttgtctgatcgtttg
gctggccctgacaggatgtctctcccatcgttgatttccgttggtgctgttcaccagcat
ttgctgcgaaccaagcaacgtcccaaggctgccatctttgctgaagccggagactgtaag
gaggtgcatgactacgcaactattttcggatatggatgcgatggagtctgcccatacatg
gcatacgaagcactctgcaaaatgaatcacgatggattggtcgaggccaagtctaagaaa
gagttcactgatgacgagatcatgaccaactacagaaaggcagtggccaagggattgttg
aaagtgatgagtaagatgggtatttccacgctccaaagttacaagggtgctcaggtcttt
gaagcagtgggtctcgctgatgagatcgtctaccgttgctttactggcacaacgacacgt
atccaaggaactgactttgaggctctctaccgtgatttggaacgcttgcataagattggg
tatcccgagaacaataatattggaactattttgttgcagaatgatggacagttgcactac
cgtgatggaggcgaggctcacttgaacactcctggtggaatggcaaacttgcagattgct
gcacgaactaactctcgcgaggcatacaaagagtttgcccgcttgactaacgagcagaac
atgaaggtcactcttcgtggtcagctgaaattcaagtttgatccttctcgttcggttcct
ttggacgacgttgagcctgttaaggagattgtgaagcgtttcgcgaccggagctatgtcc
ctcggatcaatcagtcgtgaggctcacgagactcttgcaaaggcgatgaatgctattggg
ggacgttctaataccggtgaaggcggtgaggatccgatgcgtttcctcgacgatcgtagg
tccagtattaagcaggttgcgtcgggtcgttttggcgtgacttcgcactacttggcaaac
agtgaccagatccaaatcaagatggctcaaggagccaagcccggtgagggaggagagctt
cctggattcaaagtatctgaatacattgcagagaatcgtcacacaacacctggagtcggt
cttatctcccctccaccgcatcacgacatttactccattgaggatcttgctcagcttatc
catgacttgaagaacgcccaacccactggagaggtgtctgtgaagcttgtttcggaggtt
ggtgttggtgtcgttgctgccggagttgccaaggcacttgccgatcatatcaccatcagt
ggacacgacggaggaactggagctgccgcttggactggagtgaagggagctggccttcct
tgggagcttggactcgcagagacacagcaaactctggttctgaacggattgcgtgatcgt
gtgaagctacagacggatggacagctcaagactggacgtgatgttgtcattgcttgcctt
cttggagcagaggagtttggatttgccacgggtcccctcattgctatgggttgtatcatg
atgcgcaaatgtcacttgaacacttgccctgtgggtattgcaacccaagacgaagagttg
aggaagaagttcgcaggtcaaccagagcatgtgatgaactaccttttcttgatggccgag
gagattcgtgagatcatggccaagttgggttacactaagatggaggatatggttggccag
acacagcacttggaagtgaacaagcgtggtcttcattacaagagccgcgggcttgatctc
actccgttgctcacacctgcatcagaacttaaccctaccgcaggaatccgcaacttgaac
acccaatatcacggtctcgatttggcgaaggacaacgtgttgatcgagaaggcaaaggat
gcacttgagaatggaacgcccgttgtgtttgaagaagacattacaaacctcaaccgcact
tgtggaacaatgttatcataccaaatctccaaacgttacggaaaggagggtctaccagat
gacacaatccaaatcaagatgaaggggcacgctggacagtcgtttgctttcacacttgcg
aaaggagtcaccatgaccgtggagggagatgccaacgattacactggaaagggactttcc
ggtggaaagattgctgtctatccatcacaggaagtcatcgatgatggctttgtttctgag
gacaatgtaattgtcggaaatgtctgtctgtatggcgcaactgctggaaaggccttcttc
cgtggtaaggctggagaacgattctgcgtgaggaattctggagccttggctgtcgtggaa
ggaacgggagaccactgtgctgagtacatgactggaggcgacctcgttgtgcttggtgag
actggaaggaactttggagcaggaatgagcggaggaatcgcttacgtttatgatccagaa
ggcaagttccctgaacgatgcaacatgggacttgttgctctcgaagagattgataccgtc
gaagagaaagagaaggtgtttggtttcatccaagagcacgtagcaatgacgggaagtccc
gtgggtcaacgtatgttggagaactgggacgctgagcacaagaagttcgtaaaggtcttc
cctcatgattacaaacgtgtacttgaagagcgagcagctgcgaagaagttggttgctgca
tag
DBGET
integrated database retrieval system
