Thalassiosira pseudonana: THAPSDRAFT_29936
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Entry
THAPSDRAFT_29936 CDS
T01078
Name
(RefSeq) DNA replication licensing factor MCM2
KO
K02540
DNA replication licensing factor MCM2 [EC:
5.6.2.3
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
THAPSDRAFT_29936
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
tps03032
]
THAPSDRAFT_29936
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_29936
Enzymes [BR:
tps01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
THAPSDRAFT_29936
DNA replication proteins [BR:
tps03032
]
Eukaryotic type
DNA Replication Initiation Factors
pre-RC (pre-replication complex)
THAPSDRAFT_29936
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Other centrosome associated proteins
THAPSDRAFT_29936
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MCM
MCM_OB
MCM_lid
WH_MCM2
MCM_N
Mg_chelatase
AAA_5
AAA_3
Colicin-DNase
AAA_lid_2
Motif
Other DBs
NCBI-GeneID:
7450833
NCBI-ProteinID:
XP_002293687
JGI:
29936
UniProt:
B8CC29
LinkDB
All DBs
Position
14:160767..163639
Genome browser
AA seq
855 aa
AA seq
DB search
MRGEGRGGRASGFYGALEELEEGMEEEEEERRRRRGMFDRRGMRGEEGGDVPEDVMDESE
DDDNFEEEEGVNLEAFDVPLREWIAQDRTRREIQRKFRVFLSTFREGLDFDEDEDDDNLN
EAEIKRRKRLRAATAPTYEDRIRLMCASNKAALEVSYLHLMQVEPTLALWISEAPRDMFD
VLNEAATRHTLRLFPSYHTIRDEIHVRISDVPIVDSLRDLRRAHLDGLVKVSGVITRRSG
VFPQLKLAYYDCIKCKFTTGPFRIEDTSSHSSGPDGSQRDVSEMHSPSMCPECESEGPFK
LNSSRSRYRNYQRVNLQERPGSVPPGRVPRTKEVVFLDDLVDIGRPGEEVEVTGIFCHSY
DSYLTQRSGFPVFQTYVYANHIRKKEDASSASNLSETDRKLILELAADPNIGKRIVQSIA
PSIYGHEHVKMALAMALFGAVPKNVDDKHRIRGDVNVLILGDPGCAKSQMLKYAEATAPR
AVYSTGKGASAVGLTANVHKDPLTREWTLEGGALVLADRGVCLIDEFDKMNEQDRTSIHE
AMEQQSISVSKAGIVTSLQARCSVIAAANPIGGRYDSSCTLAENVELTDPILQRFDCLCV
LQDVVDPVADERLASFVTESHMMSVPTSEIARGAALAPERARLEPDENGVDVGDLIPQSL
LRKYIQYARANCRPALRGGTFDQEKIASLYVQLRKESTNSGGVPIAVRHIESIMRMSEAH
AKMHLRDYVRDDDMDASIKMMLESFISAQKFSVRRSLRRSFAKFLSSGEDRVHLLLHILQ
DMMRNEAMYQTIRKRQRGERDGVEILEVPLEEFESRARDRRIYDVADFCKGHAFEEAGYT
LDMRRRVITRSINSM
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atgaggggagagggacgtggggggagggctagtggattttatggagctttggaggagttg
gaagagggtatggaggaggaggaagaagaaaggaggagacgtcgtggaatgtttgaccgt
cgtggcatgcgcggagaagaagggggtgatgtcccagaggacgtcatggacgaaagtgaa
gacgatgacaactttgaagaagaagagggagtcaaccttgaagcatttgacgtgccacta
cgcgagtggattgctcaagataggactcgtagggagattcaaaggaagtttcgtgtcttt
ttatccacctttcgcgagggattggactttgatgaggatgaagatgatgataacttgaac
gaggcagagataaaacgtcgcaagaggctcagagctgcaactgcaccaacgtacgaggat
aggattcgtctcatgtgtgcttccaataaggccgcattggaagtgtcctaccttcatcta
atgcaagtggagcctactctggctttgtggatcagtgaggctccccgtgatatgtttgat
gtgttgaacgaggccgctactcgtcatactttgaggttattcccttcgtatcacaccatt
cgtgatgagattcacgttcgtatttcggatgtgcctatcgtggattctcttcgtgatttg
cgtcgtgctcatttggatggacttgtgaaggtatctggggttatcactcgacgttcgggg
gtctttcctcagttgaaacttgcatactacgattgcatcaaatgtaagttcaccacgggg
ccgtttcgtattgaggatacgtcctctcattcttctgggccggatggatctcagcgtgat
gtgtcggagatgcactctccgtcaatgtgccctgagtgcgaatcggaagggccgttcaaa
ttgaactcttcgaggtcgaggtacaggaactaccagagggtaaatttgcaggaacgtcct
ggatctgtccctccaggtcgtgtccctcgtacgaaggaggtggttttcttggatgatttg
gtggatatcggcaggcctggggaggaagtggaggtaactggcatcttttgccactcgtac
gattcttacttgacgcaaagaagtggatttcccgtgtttcagacgtatgtatatgcgaat
catattcgcaagaaagaggatgcttccagtgcttccaacctgtccgagactgatcgcaag
ttgattctggagttagcggctgatcctaacattgggaagcgaattgtgcagagtattgca
ccctctatttacggacatgagcacgtcaagatggcattggccatggcgttgtttggagct
gttcccaagaatgtggacgataagcatcgtatccgtggagatgtcaatgtgttgattttg
ggcgatccaggttgtgccaagagtcaaatgctgaaatatgccgaggcgacggcaccgagg
gctgtttacagtacaggaaagggagcgagtgcagtgggtttgactgcgaatgtgcacaag
gatccgttgacgagggagtggacgttggagggaggagctcttgttctcgccgatcgtgga
gtgtgtctcattgatgagtttgacaaaatgaatgagcaggatagaacgtctatccacgag
gctatggaacagcagtctatctcggtgtcaaaggctggaatcgtcactagtcttcaagca
cgttgctccgtcattgcagctgctaaccccatcggtggtcgttacgatagttcctgcaca
ctggctgagaacgtggagcttacagatcccatccttcagcgttttgattgcctttgcgtg
ttgcaggacgttgtagacccagtagctgacgaacgcctcgcatccttcgtaacggaaagt
cacatgatgagtgttccaactagtgagattgcacgtggagcagctctagctcccgagcgt
gcccgtttagaacctgatgagaatggtgttgacgttggagacttgattccacaatctttg
cttcgtaaatacattcaatatgcccgagccaactgtcgtcctgctcttcgcggaggcacc
ttcgaccaggagaagattgcatcactttatgtgcagctacgaaaggaatccacaaactcg
ggaggtgtgccgattgcagttcgtcacattgagtccatcatgcgtatgtctgaagctcat
gccaagatgcaccttcgtgactacgtccgagacgatgacatggatgccagcatcaaaatg
atgttagaaagtttcatcagtgcacaaaagttcagtgtgaggagaagtttgcgtcgatcc
tttgccaaatttttgagctcgggagaagatcgtgtgcacttgctccttcacattttgcag
gatatgatgcgaaatgaggcaatgtatcaaactattcggaagaggcaacgtggggagaga
gacggggtggagatattggaagttcctttggaggaatttgagagtagggctagggatcgc
aggatttatgatgttgcagacttttgcaaggggcatgcgtttgaagaggccgggtacact
ctcgacatgagacgcagggtgatcacaagaagcatcaatagcatgtaa
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