Thalassiosira pseudonana: THAPSDRAFT_30004
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Entry
THAPSDRAFT_30004 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03453
bile acid:Na+ symporter, BASS family
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09190 Not Included in Pathway or Brite
09193 Unclassified: signaling and cellular processes
99977 Transport
THAPSDRAFT_30004
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SBF
SBF_like
Motif
Other DBs
NCBI-GeneID:
7452664
NCBI-ProteinID:
XP_002293922
JGI:
30004
UniProt:
B8CCC5
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Position
14:complement(435435..436856)
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AA seq
419 aa
AA seq
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MGSCHQIAHAFAPPTSIHRRSHVMPKMMVHRGISTSNIYPMQRRQGHVSSTLYSTSTADD
ETPKIDQVLSKLTSLFPLFVLGSAILGSYAPQTLNWVNSGNCISMMLAGVMLGTGMTLER
SDFATILTSKSQRTSIPVGVLCQFILMPMSAALIGRTLLLPLNEVGNHLFLGLVLVGCSP
GGTASNLVSLIAGADVALSVLLTACSTILASFVTPLLTKFIVGSAIAVSGTALCVATAKV
VLAPVTLGVLLNEKVPKLCRWVSRFTPFASVILVSLICGGVVAHNAAMVTGSASRAAGLV
IGGFALSLPSLILLSVILTHTLGFTAGYLVPKKLFGFTDKTSRTISIETGMQNSALAVVL
AKSIGADPLSYLPGALSATAHSCLGSGLAAFWRWLDSRKDTDCKTEEGGGEDYRHLIKV
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgtgtcaccagattgctcatgccttcgcgccaccaacttcaatacaccgtcgt
agtcatgtaatgccaaagatgatggtacatcgtggaatttcaacgtcaaacatttatcct
atgcaaagacgacaaggccatgttagttcgacactgtattctacgtcgacagccgatgac
gaaactccaaagatcgaccaagtgctatcaaagttgacatctctcttccctctgtttgtg
ctggggtctgcaattctgggctcgtacgctccgcaaactttgaactgggtgaatagtgga
aactgtatctcaatgatgctggcaggagtaatgcttggcactggaatgacgttagaacgc
tctgatttcgcaaccattctaacatcaaagtcgcaacgcacttccatcccagtcggagtt
ctctgtcagttcattttaatgcccatgtcagcagctctcatcggacgtactcttctccta
cccttgaacgaagttggaaatcacttgttcttaggattggtattggtaggatgtagcccg
ggtggtactgcaagcaacctcgtgagtctcattgctggagcagatgtggcattgtccgtg
ctcctgacggcgtgcagtacaattttggcttcatttgtcacgccactgttgacaaagttc
attgttgggagtgcaatcgcggtcagtgggacggctctttgtgtagctacagcaaaggta
gttttggcaccggtaacgttgggagttctcctcaacgagaaggtcccaaagctgtgtcga
tgggtatcgaggtttactccatttgcttctgtgatattggtcagtttgatctgcggagga
gtggttgctcacaacgcagcaatggttacggggagtgctagcagggcagcaggattggtc
attggaggtttcgcattgtctcttcccagtttgatccttctctcggtcatcttgacgcat
acgcttggattcactgctggatatttggtaccaaagaagctgtttggtttcactgacaaa
acgtccagaacaatatccatcgagactgggatgcaaaactcggctttggcggtggtgttg
gcaaagagtattggtgctgatccactatcgtacttgcccggagcattaagtgccacagca
cactcgtgtctcggaagtggattggctgcattttggagatggttagactctcgtaaggat
actgattgtaagactgaagagggtggaggggaggattatcgacacttgattaaggtctga
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