Thalassiosira pseudonana: THAPSDRAFT_30105
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Entry
THAPSDRAFT_30105 CDS
T01078
Symbol
FPS1
Name
(RefSeq) probable farnesyl pyrophosphate synthetase
KO
K00787
farnesyl diphosphate synthase [EC:
2.5.1.1
2.5.1.10
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00900
Terpenoid backbone biosynthesis
tps01100
Metabolic pathways
tps01110
Biosynthesis of secondary metabolites
Module
tps_M00367
C10-C20 isoprenoid biosynthesis, non-plant eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
THAPSDRAFT_30105 (FPS1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
tps01006
]
THAPSDRAFT_30105 (FPS1)
Enzymes [BR:
tps01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
THAPSDRAFT_30105 (FPS1)
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
THAPSDRAFT_30105 (FPS1)
Prenyltransferases [BR:
tps01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
THAPSDRAFT_30105 (FPS1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-GeneID:
7441960
NCBI-ProteinID:
XP_002294044
JGI:
30105
UniProt:
B8CD36
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All DBs
Position
15:155524..156805
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AA seq
360 aa
AA seq
DB search
MTSTDRDAFLAIYKEIETDLIADINKLPALSPTVKEQLTTYYSTCLPYTVPGGKMTRGLT
VIKGVEVLKGRILTEVEYKHAAILGWQVEWLQAFFLVADDIMDGSITRRGNPCWYKQPNV
TQDNAINDALILENMIYQTLRRHFKGHPSYVQILELFIDTTYQTEIGQHIDTNGTPYADG
KRAELDLTRFTLDRYQGCVRYKTCYYSFYLSCALALAYCGYDPESGEGKELYANAEDVCM
RLGEYFQIQDDVLDAFAPPEVLGKIGTDIEDAKCSWLVCKALEMVNEEQKKVLVENYGKH
DAEGVEKVKELYRELKLEELFTAYEEEQKKACDELIAKIKPESFQDLFKFLLGKIYKRQK
NT seq
1083 nt
NT seq
+upstream
nt +downstream
nt
atgacctccaccgacagagacgccttcctcgccatctacaaagagatcgaaaccgacctc
atcgccgacatcaacaaactccccgccctctcccccactgtcaaagaacaactgaccacc
tactactccacatgccttccctacaccgtccccggggggaaaatgacacgtggcctcacc
gtcattaaaggcgtggaggtgctcaagggccgcatcttgaccgaggtggaatacaaacac
gccgccattctaggatggcaggtggaatggcttcaggcgttctttttggtggcggacgac
atcatggatgggagcatcactcgtcgtgggaatccgtgttggtataaacagcccaatgtg
actcaggacaatgctattaacgatgctcttattttggagaatatgatttatcaaacgttg
aggaggcattttaaggggcatccttcctatgtgcagatattggagttgttcattgacacg
acttatcagacggagattggacagcatattgatacgaatggcactccctatgcggatgga
aagagggctgaattggatttgacgaggtttacattggataggtatcagggatgtgttcgt
tacaagacgtgttattattcgttctacctctcgtgtgccctggcgttggcgtattgtgga
tatgatcctgagagtggagaggggaaagaactctatgccaatgccgaagatgtgtgcatg
cgtctcggggagtactttcagattcaggatgatgtgttggatgcgtttgctcctccggag
gtgcttggcaagattggaacggatattgaagatgccaagtgttcgtggttggtgtgcaag
gctttggagatggtgaatgaggagcagaagaaagtgcttgtggagaattacggaaagcat
gatgctgagggggtggagaaggtgaaggagttgtatagggagttgaagttggaggaattg
ttcactgcttatgaggaggagcagaagaaggcgtgtgacgagttgattgcaaagatcaag
cctgagagctttcaggacttgttcaagttccttttgggcaagatttacaagcgtcagaag
taa
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