Thalassiosira pseudonana: THAPSDRAFT_30454
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Entry
THAPSDRAFT_30454 CDS
T01078
Name
(RefSeq) predicted protein
KO
K14561
U3 small nucleolar ribonucleoprotein protein IMP4
Organism
tps
Thalassiosira pseudonana
Pathway
tps03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
THAPSDRAFT_30454
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_30454
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
THAPSDRAFT_30454
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Brix
DUF3764
Sas-6-like_oligomerization
Motif
Other DBs
NCBI-GeneID:
7446292
NCBI-ProteinID:
XP_002296937
JGI:
30454
UniProt:
B8LD76
LinkDB
All DBs
Position
19
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AA seq
299 aa
AA seq
DB search
MPSTSTAAASHRRQARLRREYLYRKSLTSSASSDYTAKRRIREALSQGKALPTELRATYD
KFKGEIDAEDAKTEQNKSHVDDEYGDAGWSDPRVCVTTSRAPSSRLKQFAKEMKLLIPNS
TRINRGSHRVDELVDVCKTSDFSDLVVVQETRGEPDGLIVCHLPLGPTAYFTLNGAVLRH
DLEGGAAPMSEAYPHIILNQFNSELGKRVGNILKCLFPIPKLDTRRVVTFSNNDDHISFR
HHVYNKEGNKEDRVTLYEVGPRFEMRLYQIKLGTLEMKDAENEYVLRPYLNTAKKNKVL
NT seq
900 nt
NT seq
+upstream
nt +downstream
nt
atgccatcaacctccacagcagccgcctcccaccgccgccaagcccgcctccgccgcgaa
tacctctaccgcaaatccctcacctcctccgcctcctccgactacaccgccaaacgacgc
atacgcgaagctctctcccaaggcaaagccctccccaccgagctacgcgccacttatgat
aaattcaagggtgagattgatgcagaggacgccaagacggagcagaataagagccatgtg
gatgatgagtacggtgatgctggttggagtgatccgcgggtttgtgtgacgacgtctcgt
gcaccgagttcgaggttgaagcaatttgcaaaggagatgaagttgttgattccaaattcg
acgaggattaataggggaagtcatcgtgtggatgagttggtggatgtttgcaagacttcg
gactttagtgatttggtggtcgttcaagagactaggggagagcccgatgggttgattgtg
tgccacttaccactgggtcctacagcatactttacattgaatggagcagtattgaggcat
gatttggaaggaggggcggctccgatgtcggaagcctatcctcacatcatattgaatcag
ttcaattccgagttggggaaacgagtggggaacatcctcaagtgcctctttccaattcca
aagttggatacgaggcgagtggttacattctccaataatgacgaccacattagtttccgt
catcatgtgtacaataaagagggtaacaaggaggatagagtgacattgtatgaggttggt
ccgaggtttgaaatgagattgtatcagattaagttgggtacgttggagatgaaggatgcg
gagaatgagtatgtgttgagaccttatttgaacactgcgaagaagaataaggtgttgtga
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