Thalassiosira pseudonana: THAPSDRAFT_31014
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Entry
THAPSDRAFT_31014 CDS
T01078
Name
(RefSeq) mu subunit of AP4-like protein
KO
K12402
AP-4 complex subunit mu-1
Organism
tps
Thalassiosira pseudonana
Pathway
tps04142
Lysosome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04142 Lysosome
THAPSDRAFT_31014
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_31014
Membrane trafficking [BR:
tps04131
]
Endosome - Golgi transport
Others
AP-4 complex
THAPSDRAFT_31014
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Adap_comp_sub
Longin
Motif
Other DBs
NCBI-GeneID:
7445085
NCBI-ProteinID:
XP_002286426
JGI:
31014
UniProt:
B8BS51
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Position
1:2600846..2602449
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AA seq
452 aa
AA seq
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MINNFFVISPRGDTVIAKTYRSKSGVGAHERSHTEAFFRKVTFWDGFGDAPPVFVMPDGY
SYLHVKRNGLIFGCATEKNVSPVVVIELLSKIAKVFKDYCGTLSEESIRKNFILLYELLD
ELLDYGYPQVTQTENLKAFVYNEPIVVAPVADTGKMINPKTASANAVHKPVIGSVDTDGK
KTSLSNNQKNEIFVDILERLSVLFSNNGYVLNSTIDGCIQMKSYLAGNPQLRLALNEDLV
IGKNTRSAYSSGVTVDDINFNDCVNLSEWEHGRTLSFFPPDGEFIVLNYRVTGEFKTPFR
IFPSIEEVEPNKLEMSLHVRAEIPDNHFGANVSIEVPLPHTTTAASCSVVSTPGANGVRA
EYESHEKKILWTLKKFPGCTEQTMRAKITLSGPCTSQIRREIGPINMNFEIPMYNVSSLQ
VRYLRIAENMPGYTPYRWVRYVTQSSSYVCRL
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atgataaacaacttcttcgtcatctccccacgaggcgacaccgtaatagccaaaacgtac
cgttccaaatccggcgtgggcgcacacgaacgatctcacacggaggcattttttcgcaag
gtcacattttgggatgggtttggggatgctcctcctgtgtttgtcatgccggatggatac
agttatttgcacgtgaaacgaaatggactgatttttggatgtgctacggagaagaatgtc
agtccggtggttgttattgagctcctgtcaaagattgccaaagtcttcaaagactactgc
ggcaccctctccgaagaatccattcgcaaaaacttcatcctcctctacgaactcctggac
gaactcctcgactacggctacccccaagtgacgcaaactgaaaacctcaaagcatttgtc
tacaatgaacccatcgtcgtggctccagtagcagatacgggtaaaatgatcaatcccaag
acggcaagcgccaatgcagttcataaaccggtgattggatcggtggatacggacggaaag
aagacgagtttgagtaataatcaaaagaatgagatatttgtggatatattagagaggtta
agtgtgctattctccaacaatggctatgttctcaatagcacgattgatgggtgtattcag
atgaagagttatttggctggaaatcctcagttacgattggcattgaatgaggatcttgtc
attggaaagaataccagatcagcctacagttcgggcgtcacggtggacgacatcaacttc
aacgactgcgtcaatctatccgagtgggagcacgggcgaacactctccttctttcccccc
gatggagaattcatcgtactcaattaccgcgtgacgggggagttcaaaacgccgttccga
atctttccatccatcgaggaggtggaaccaaacaaattagagatgtcgcttcatgttcgg
gcggagataccagacaatcatttcggtgcgaatgtgtcgatagaagttcctttgccccat
actacaactgctgcatcgtgtagtgtggtgagcaccccgggtgcgaacggagttcgagcc
gagtatgaatctcatgagaagaagattttgtggacgttaaaaaagttccctgggtgtacg
gagcagactatgagagcaaagattacgttgagtggtccttgtacgtcgcagattcggagg
gagattgggccaatcaacatgaactttgagattcccatgtacaatgtgtcgagtttgcag
gtgagatacttgaggattgcagagaatatgccgggatatactccgtatcgttgggtgagg
tatgtgacgcagagtagctcgtacgtctgtcggttgtga
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