KEGG   Thalassiosira pseudonana: THAPSDRAFT_31062
Entry
THAPSDRAFT_31062  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K03363  cell division cycle 20, cofactor of APC complex
Organism
tps  Thalassiosira pseudonana
Pathway
tps04120  Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04120 Ubiquitin mediated proteolysis
    THAPSDRAFT_31062
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:tps04121]
    THAPSDRAFT_31062
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_31062
Ubiquitin system [BR:tps04121]
 Ubiquitin ligases (E3)
  Multi subunit type E3
   APC/C
    Target recognizing subunit
     THAPSDRAFT_31062
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Sister chromatid separation proteins
   APC/C complex
    THAPSDRAFT_31062
SSDB
Motif
Pfam: WD40_CDC20-Fz WD40 WD40_WDHD1_1st WD40_Prp19 Beta-prop_EML_2 Beta-prop_CAF1B_HIR1 ANAPC4_WD40 Beta-prop_TEP1_2nd Beta-prop_WDR19_1st Beta-prop_EML EIF3I WD40_MABP1-WDR62_2nd Beta-prop_RIG_2nd WDR55 Beta-prop_WDR90_POC16_2nd Beta-prop_SCAP Beta-prop_IFT140_1st WD40_MABP1-WDR62_1st eIF2A Beta-prop_EIPR1 Beta-prop_WDR75_1st Beta-prop_RIG_1st Beta-prop_HPS5 Ge1_WD40 Beta-prop_IFT122_1st Beta-prop_WDR35_TULP_N Beta-prop_DCAF4 WD40_RFWD3 DUF1513
Other DBs
NCBI-GeneID: 7445493
NCBI-ProteinID: XP_002287004
JGI: 31062
UniProt: B8BS23
LinkDB
Position
1:complement(2527496..2528695)
AA seq 399 aa
MLEYKSSLLGIDDSKSRILSFADKAPAPKGDTVNNLQVLYSGSTTARKNKSSTKLVSRHI
PSAPTRILDAPDLLDDYYLNLLSWSDTNVLAVALSQTVYLWNAETGAIDELCNVESEGPD
AHISSVSWIQEGGGHLAVGTSWGKTLLWDVTAGKQLRKMDGHTDRIGALSWNRHILSSGG
RDNLIVNHDVRIAEHKTATLSGHSQEVCGLAWSPDGMTLASGANDNKLCLWDATASSSSR
ARYELTEHQAAVKALAWSPHERNLLATGGGTADRCIKFWNTQTGSMLNSIDTGSQVCALQ
WNPFEKEILSSHGFARNQLCLWKYPTMAKVKELDGHTARVLHMATSPDGASVVSAAADET
LRFWDVFAPPSKTHTGKRGASDVPGGAKSKKLSRTMHIR
NT seq 1200 nt   +upstreamnt  +downstreamnt
atgcttgaatacaagtcgtctcttcttggtattgatgattcaaagagtcgtatcttgagt
tttgcagacaaggcacccgcacccaagggcgatactgtcaacaaccttcaagtattgtat
tctggctccaccaccgcccgtaagaacaagagctccaccaagctcgttagcagacacatc
ccatctgcacccactcgtatcttggatgctcctgatttgctcgatgattactacctcaat
cttttgtcgtggtctgatacgaatgtgttggcagtggctctttctcagactgtgtacctt
tggaatgcggagactggagctattgatgaactttgcaacgtggagagcgagggacctgat
gctcacatctccagtgtctcttggatccaagaaggtggtggacatttagctgttggtaca
tcatggggaaagactttgctttgggacgtcactgcaggaaagcaacttcgtaagatggac
gggcacactgatcgtatcggtgctttgtcttggaaccgtcacatcctctccagtggtggg
cgtgacaacctcatcgtgaaccatgatgtcagaatcgcagagcacaagactgctactctt
tcgggtcattcgcaggaagtttgtggactcgcttggtcccccgatggtatgactcttgcc
agtggtgccaatgacaacaaactgtgcttgtgggatgctactgcgtcgtcgtcatcgcgt
gctcgttacgagttgacggagcatcaggctgcagtgaaagctttggcttggtctcctcat
gaacgcaacctccttgccactggtggaggaactgccgacaggtgcatcaagttctggaac
acacaaactggctctatgctcaactccatcgatactggctcccaagtctgcgcattgcag
tggaacccttttgagaaggaaatcctttcttctcatggatttgctcgcaaccaactttgc
ctttggaagtaccctaccatggccaaggttaaggagcttgatggacacaccgcacgagtc
cttcacatggctacatcacccgacggtgcctcggttgtttcggcagctgctgatgagact
ttgcgtttctgggacgtcttcgctccaccttccaagacccacacagggaagcgtggtgca
tccgatgttcctggaggagccaaaagcaagaagcttagcaggaccatgcacattcgttga

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