KEGG   Thalassiosira pseudonana: THAPSDRAFT_31569
Entry
THAPSDRAFT_31569  CDS       T01078                                 
Symbol
TUB3
Name
(RefSeq) tubulin beta
  KO
K07375  tubulin beta
Organism
tps  Thalassiosira pseudonana
Pathway
tps04145  Phagosome
tps04814  Motor proteins
Brite
KEGG Orthology (KO) [BR:tps00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04145 Phagosome
    THAPSDRAFT_31569 (TUB3)
  09142 Cell motility
   04814 Motor proteins
    THAPSDRAFT_31569 (TUB3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:tps03036]
    THAPSDRAFT_31569 (TUB3)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:tps04812]
    THAPSDRAFT_31569 (TUB3)
   04147 Exosome [BR:tps04147]
    THAPSDRAFT_31569 (TUB3)
Chromosome and associated proteins [BR:tps03036]
 Eukaryotic type
  Centrosome formation proteins
   Microtubules and associated factors
    Other tubulins
     THAPSDRAFT_31569 (TUB3)
Cytoskeleton proteins [BR:tps04812]
 Eukaryotic cytoskeleton proteins
  Microtubules
   Tubulins
    THAPSDRAFT_31569 (TUB3)
Exosome [BR:tps04147]
 Exosomal proteins
  Exosomal proteins of other body fluids (saliva and urine)
   THAPSDRAFT_31569 (TUB3)
  Exosomal proteins of colorectal cancer cells
   THAPSDRAFT_31569 (TUB3)
  Exosomal proteins of bladder cancer cells
   THAPSDRAFT_31569 (TUB3)
SSDB
Motif
Pfam: Tubulin Tubulin_C Misat_Tub_SegII Tubulin_3 Tubulin_2
Other DBs
NCBI-GeneID: 7449027
NCBI-ProteinID: XP_002286362
JGI: 31569
UniProt: B8BRR6
LinkDB
Position
1:2258934..2260750
AA seq 449 aa
MREIVHLQAGQCGNQIGSKFWETMSREHGITGNGTYEGDNAALQLQRINVYFHEGASGRY
VPRAVLTDLEPGTMDAIRAGPMGAVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAIMDV
TRKEAEACDMLQGFQITHSMGGGTGSGMGTLLVSKIREEFPDRIMTTYSVVPSPKVSDTV
VEPYNATLSIHQLVENADQCFALDNEALYDICFRTLKLANPSYGDLNQLIAAAISGTTCS
LRFPGQLNCDLRKLSVNMVPFPRLHFFLVGFAPLTSSQSLEFRTLSVPELTQQAFDAKNM
MCAADPRHGRYLTCAMMFRGAMSSKEVDDEMLKMVSKNSGYFVEWIPNNLKASICDVPPA
GLKMSSVFIGNSTCIQEAWKRVAEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLV
SEYQQYQDATVGDDDISGEFADESEILGE
NT seq 1350 nt   +upstreamnt  +downstreamnt
atgagggaaatcgttcatcttcaagcaggacaatgtggtaaccagattggttccaagttt
tgggagaccatgtcccgtgagcacggcatcaccggcaacggaacctacgaaggggacaac
gccgcccttcaactccaacgaatcaacgtctacttccacgagggggcctccggccgctac
gtcccccgcgccgtcctcacggacctcgagcccggaaccatggatgccatccgggccgga
cccatgggagccgtctttcgacctgacaatttcgtttttgggcagagtggagcggggaac
aattgggccaaggggcattataccgagggagcggagttggttgatgccattatggatgtg
acaaggaaggaggctgaggcttgtgatatgcttcagggatttcagattacgcattctatg
ggaggaggaactgggtcgggtatgggaactcttcttgtgagcaagattagggaagagttt
cctgatcgtatcatgacaacatacagtgtggtgccttctcccaaggtttcggataccgtt
gtggagccttacaatgccaccctttccatccatcagctcgtggagaatgccgatcagtgc
tttgctctcgacaatgaggcactctacgacatttgcttccgtactctcaaactcgccaac
ccttcctacggagacctcaaccagcttattgctgctgccatctcgggaaccacctgctcc
cttcgtttcccaggacaattgaactgtgacttacgaaagctctccgtcaacatggtgccc
ttcccccgtctccacttcttcctcgttggattcgctccactcacttcgagccaatccttg
gagttccgcaccctttctgttcctgagctcacccaacaggcctttgatgccaagaacatg
atgtgtgccgccgatccccgtcacggacgttaccttacttgtgccatgatgttccgtggt
gccatgtcttccaaggaggtggatgatgagatgctcaaaatggtgagcaagaactctggc
tacttcgttgaatggatccccaacaacctcaaggcatccatctgtgatgttcctcccgcc
ggattgaaaatgtcgagtgtcttcattggtaactccacctgcatccaggaggcttggaag
cgtgtggcagagcaattcacggtcatgttccgtcgtaaggcctttcttcactggtacact
ggagagggtatggacgagatggaattcactgaggctgagtccaaccttaacgatctggtg
tctgaatatcagcaataccaggatgccactgtgggagatgacgatatttcgggtgaattt
gcggatgagagtgaaatccttggagagtaa

DBGET integrated database retrieval system