Thalassiosira pseudonana: THAPSDRAFT_31569
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Entry
THAPSDRAFT_31569 CDS
T01078
Symbol
TUB3
Name
(RefSeq) tubulin beta
KO
K07375
tubulin beta
Organism
tps
Thalassiosira pseudonana
Pathway
tps04145
Phagosome
tps04814
Motor proteins
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
THAPSDRAFT_31569 (TUB3)
09142 Cell motility
04814 Motor proteins
THAPSDRAFT_31569 (TUB3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_31569 (TUB3)
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
tps04812
]
THAPSDRAFT_31569 (TUB3)
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_31569 (TUB3)
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Microtubules and associated factors
Other tubulins
THAPSDRAFT_31569 (TUB3)
Cytoskeleton proteins [BR:
tps04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulins
THAPSDRAFT_31569 (TUB3)
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_31569 (TUB3)
Exosomal proteins of colorectal cancer cells
THAPSDRAFT_31569 (TUB3)
Exosomal proteins of bladder cancer cells
THAPSDRAFT_31569 (TUB3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tubulin
Tubulin_C
Misat_Tub_SegII
Tubulin_3
Tubulin_2
Motif
Other DBs
NCBI-GeneID:
7449027
NCBI-ProteinID:
XP_002286362
JGI:
31569
UniProt:
B8BRR6
LinkDB
All DBs
Position
1:2258934..2260750
Genome browser
AA seq
449 aa
AA seq
DB search
MREIVHLQAGQCGNQIGSKFWETMSREHGITGNGTYEGDNAALQLQRINVYFHEGASGRY
VPRAVLTDLEPGTMDAIRAGPMGAVFRPDNFVFGQSGAGNNWAKGHYTEGAELVDAIMDV
TRKEAEACDMLQGFQITHSMGGGTGSGMGTLLVSKIREEFPDRIMTTYSVVPSPKVSDTV
VEPYNATLSIHQLVENADQCFALDNEALYDICFRTLKLANPSYGDLNQLIAAAISGTTCS
LRFPGQLNCDLRKLSVNMVPFPRLHFFLVGFAPLTSSQSLEFRTLSVPELTQQAFDAKNM
MCAADPRHGRYLTCAMMFRGAMSSKEVDDEMLKMVSKNSGYFVEWIPNNLKASICDVPPA
GLKMSSVFIGNSTCIQEAWKRVAEQFTVMFRRKAFLHWYTGEGMDEMEFTEAESNLNDLV
SEYQQYQDATVGDDDISGEFADESEILGE
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagggaaatcgttcatcttcaagcaggacaatgtggtaaccagattggttccaagttt
tgggagaccatgtcccgtgagcacggcatcaccggcaacggaacctacgaaggggacaac
gccgcccttcaactccaacgaatcaacgtctacttccacgagggggcctccggccgctac
gtcccccgcgccgtcctcacggacctcgagcccggaaccatggatgccatccgggccgga
cccatgggagccgtctttcgacctgacaatttcgtttttgggcagagtggagcggggaac
aattgggccaaggggcattataccgagggagcggagttggttgatgccattatggatgtg
acaaggaaggaggctgaggcttgtgatatgcttcagggatttcagattacgcattctatg
ggaggaggaactgggtcgggtatgggaactcttcttgtgagcaagattagggaagagttt
cctgatcgtatcatgacaacatacagtgtggtgccttctcccaaggtttcggataccgtt
gtggagccttacaatgccaccctttccatccatcagctcgtggagaatgccgatcagtgc
tttgctctcgacaatgaggcactctacgacatttgcttccgtactctcaaactcgccaac
ccttcctacggagacctcaaccagcttattgctgctgccatctcgggaaccacctgctcc
cttcgtttcccaggacaattgaactgtgacttacgaaagctctccgtcaacatggtgccc
ttcccccgtctccacttcttcctcgttggattcgctccactcacttcgagccaatccttg
gagttccgcaccctttctgttcctgagctcacccaacaggcctttgatgccaagaacatg
atgtgtgccgccgatccccgtcacggacgttaccttacttgtgccatgatgttccgtggt
gccatgtcttccaaggaggtggatgatgagatgctcaaaatggtgagcaagaactctggc
tacttcgttgaatggatccccaacaacctcaaggcatccatctgtgatgttcctcccgcc
ggattgaaaatgtcgagtgtcttcattggtaactccacctgcatccaggaggcttggaag
cgtgtggcagagcaattcacggtcatgttccgtcgtaaggcctttcttcactggtacact
ggagagggtatggacgagatggaattcactgaggctgagtccaaccttaacgatctggtg
tctgaatatcagcaataccaggatgccactgtgggagatgacgatatttcgggtgaattt
gcggatgagagtgaaatccttggagagtaa
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