Thalassiosira pseudonana: THAPSDRAFT_32053
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Entry
THAPSDRAFT_32053 CDS
T01078
Name
(RefSeq) predicted protein
KO
K01881
prolyl-tRNA synthetase [EC:
6.1.1.15
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
THAPSDRAFT_32053
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
tps01007
]
THAPSDRAFT_32053
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
tps03016
]
THAPSDRAFT_32053
Enzymes [BR:
tps01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.15 proline---tRNA ligase
THAPSDRAFT_32053
Amino acid related enzymes [BR:
tps01007
]
Aminoacyl-tRNA synthetase
Class II (C/G)
THAPSDRAFT_32053
Transfer RNA biogenesis [BR:
tps03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Multi-aminoacyl-tRNA synthetase complex (MSC)
THAPSDRAFT_32053
Prokaryotic type
THAPSDRAFT_32053
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA-synt_2b
ProRS-C_1
HGTP_anticodon
Motif
Other DBs
NCBI-GeneID:
7446680
NCBI-ProteinID:
XP_002287422
JGI:
32053
UniProt:
B8BV30
LinkDB
All DBs
Position
2:<1603598..>1605217
Genome browser
AA seq
517 aa
AA seq
DB search
QKKQAVVEDAESDYITSRAENYSKWYNDIIRVCDLADNSPVRGCMVIKPWGMSIWDQIRN
DLDARIKEHGAENAYFPLLIPKSFLSKEAEHVDGFAKECAVVTHHRLTVDPSGEGGLIAD
PEAELEDPLIIRPTSETMIWNMFKKWIVSHRDLPLKMNQWANVMRWEMRTRPFLRTSEFL
WQEGHTAHATSEGALEDSKLMLDQYAEMCQNLLAIPVIKGAKSPSERFAGAEETFTIEAL
MQNGWALQSGTSHFLGQSFGKAFDVTFQDAEGKQQDVWGTSWGVSTRLIGALIMTHSDDA
GLVLPPRVAPVQVVVVPIPPKKNDEEGKVALNNALDKMVANLKSAGLKVKVDDRDYVRNG
AKYFEWERKGVPLRIELGPRDVKGGVCVFKYRVGKEEKETVSLDEVSVMAVKGLDELQEN
LLESAKERLAANINMMATYDQMKEALEKDEASEYNGPGLYLVPWKCNAENEDKIKEECKA
TIRCYPTDVNEAGMAEGKKCFYSGEDATHMALFGRAF
NT seq
1554 nt
NT seq
+upstream
nt +downstream
nt
caaaagaaacaagccgtagtagaagatgctgaatcggactacatcacctcacgtgccgag
aactactctaaatggtacaacgacatcattcgcgtctgcgacctagccgataactcaccc
gtccgaggatgtatggtcattaaaccatggggaatgtccatctgggatcaaatccgcaac
gacctcgatgcccgcatcaaagagcacggagccgaaaacgcctatttccccctcctcatt
cctaaaagcttcttgtccaaagaggcagaacacgtggatggatttgcaaaggagtgtgct
gtggtgactcatcaccggttgactgtggatccgagtggggaaggagggttgattgctgat
ccggaggctgagttggaggatcctttgataattaggcctacttcggagactatgatttgg
aatatgtttaagaaatggattgtcagtcatcgtgatttgccactcaaaatgaatcaatgg
gcaaacgtcatgaggtgggaaatgcgtactcgtccttttcttcgtacttctgagttcctt
tggcaagaaggacacactgctcacgccacttccgaaggtgctctcgaagattccaaactc
atgttggatcaatacgctgagatgtgtcaaaatctacttgctattcctgtgatcaagggt
gccaagagtccatcagaacgatttgcaggtgcagaagagacatttacaattgaggcattg
atgcaaaatggatgggctctgcagagtggcacatctcatttccttggacaaagtttcggt
aaagcatttgatgttacgttccaagacgcagagggaaagcaacaggatgtttggggtaca
tcgtggggagtatcaacacgtcttatcggagcgttgatcatgactcattctgatgatgca
ggacttgtgcttcctccacgtgtggcacctgttcaggtagtagtagtaccgatccctccc
aaaaagaatgacgaagaaggaaaggttgctttgaacaatgcactcgacaaaatggttgct
aatctcaagagtgctggactcaaggtcaaagtagacgaccgtgactacgtcagaaacggt
gcaaagtactttgagtgggaaaggaaaggagttccattgcgaattgagttggggccaaga
gatgtaaaaggtggcgtatgtgtcttcaaataccgtgtaggcaaggaggagaaggagact
gtttcgcttgatgaagtttcagttatggcagtcaagggattagacgaattgcaggagaac
cttcttgaatcggcaaaagaacgacttgcggcaaacatcaacatgatggcaacgtatgat
caaatgaaggaagctctagagaaggatgaggctagtgagtacaatgggcctggactgtac
ttagttccatggaaatgtaatgctgagaacgaagacaagattaaggaagaatgcaaggct
actatccgatgctatcctactgatgtgaacgaggctggcatggcagaaggcaagaagtgc
ttctacagtggagaggatgctactcatatggctttgtttggacgggctttctaa
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