KEGG   Thalassiosira pseudonana: THAPSDRAFT_32661
Entry
THAPSDRAFT_32661  CDS       T01078                                 
Name
(RefSeq) predicted protein
  KO
K08735  DNA mismatch repair protein MSH2
Organism
tps  Thalassiosira pseudonana
Pathway
tps03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    THAPSDRAFT_32661
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:tps03400]
    THAPSDRAFT_32661
DNA repair and recombination proteins [BR:tps03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    Mismatch and loop recognition factors
     THAPSDRAFT_32661
SSDB
Motif
Pfam: MutS_V AAA_22 MutS_III AAA_27 SAC9_GBDL_1st Rad17
Other DBs
NCBI-GeneID: 7451281
NCBI-ProteinID: XP_002288912
JGI: 32661
UniProt: B8BYC0
LinkDB
Position
3:complement(1414608..1415621)
AA seq 338 aa
VYFSTKELEQLGTKKKDLMMEYEEKQRDIVCKAMVVAASYVPVLERASMTLSELDVLASF
AYVAAYSSNGYCRPEMTDGEEDGLGIEVSYSSTERCDSSLWFSKHNISFLVNTFQLTGAR
HPCVELQDDMNFIANDFNLVFGASSFLLVTGPNMGGKSTYIRSLGAIITLAQIGSFVPCT
SAKINIVDHILARVGAGDAQDRGISTFMAEMLEASSILRTSTKRSLIIIDELGRGTSTFD
GFGLAKAISEHVVQKIGCMTVFATHFHELTALEEQEASVTNCHVSAHSDKQNGLTFLYEV
RPGPCLESFGIQVAEMANMPSNIITDAKRKAKQLENFD
NT seq 1014 nt   +upstreamnt  +downstreamnt
gtgtatttctccacgaaggagttggaacagctcggcacaaagaagaaggatttgatgatg
gagtacgaggagaagcaacgtgatattgtatgcaaggccatggttgtggctgcaagttac
gtgccagtgttggaacgagcatcgatgactttatctgagttggatgtattggcgagcttt
gcttatgtggctgcatacagtagcaacggatactgtcgtcctgagatgacggacggagaa
gaggacggattgggaattgaggttagttattcgagcaccgaacgttgcgattcttcgctt
tggttctctaaacacaacatatcttttctcgtcaatacatttcagctcacgggggctcgt
catccttgtgtggagcttcaagatgatatgaacttcattgccaatgactttaacctcgta
ttcggtgcatcctcattccttcttgtcactggacctaacatgggaggaaagtcaacgtac
attcgctcgcttggagctatcattaccttggcgcagattggaagttttgtaccctgtacc
tcggccaaaatcaacattgttgatcatatcttggccagagttggagctggtgacgcacag
gatcgtggtatatctaccttcatggctgaaatgctggaggcttcttccattcttcgcacc
tcgaccaaacgcagtctcatcatcattgacgagctcggaagaggaacgagcacatttgat
ggatttggtttggcaaaagcgatatcagaacatgtcgttcagaaaattggttgcatgact
gtgtttgcaactcacttccatgaactgacggcgttggaagagcaagaggcctcggtaacc
aattgccacgtgtctgcccacagcgacaaacagaacggacttacgtttctctacgaagta
cgaccagggccttgcttggaaagttttggtattcaagtggccgaaatggcaaacatgccg
tcaaatatcatcaccgatgccaaacgcaaagcaaaacagttggagaactttgac

DBGET integrated database retrieval system