Thalassiosira pseudonana: THAPSDRAFT_32882
Help
Entry
THAPSDRAFT_32882 CDS
T01078
Name
(RefSeq) hypothetical protein
KO
K12661
L-rhamnonate dehydratase [EC:
4.2.1.90
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00051
Fructose and mannose metabolism
tps01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00051 Fructose and mannose metabolism
THAPSDRAFT_32882
Enzymes [BR:
tps01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.90 L-rhamnonate dehydratase
THAPSDRAFT_32882
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MR_MLE_C
MR_MLE_N
Motif
Other DBs
NCBI-GeneID:
7441889
NCBI-ProteinID:
XP_002288865
JGI:
32882
UniProt:
B8BY23
LinkDB
All DBs
Position
3:complement(1188595..1190336)
Genome browser
AA seq
401 aa
AA seq
DB search
VREIRAYTFGSSSSEEKSGGGADCHRQSSGHWIVDTPISNPMSVYEEYRTSRTSWGIGAL
GSVIVEVELNDEAKTVGVGISIGGEAACFMVENHLSRFVEGQDPTNVELIWDQMYRSTLN
YGRKGIAIQAISAVDLAIWDALGKLKGVPVYELLGGKTKEKMPCYATTSRPDLAKEMGFW
GAKFPLPYGPANGEWGMRENIATVRKWREAVGEDFPIMIDCYMSLTLPYAIEFARKCEPY
NVKWIEETLPPDDYEGYSELKKAVKTTLITTGEHEYTRYGFRQLLERKCADVLQPDITWC
GGMTEARRIVALASAYDIPVIPHGSSIYSYHLQICFPSCPMAEFLVMSPKADSIVSFFGN
LFTDEPLPQNGYVELPHDKPGFGVTLNRDGLNMKRPYPRGV
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
gttcgtgaaattcgagcctacaccttcggttcctcgtcctctgaagaaaaatctggtgga
ggggccgattgtcaccgacaatcctctggacactggattgttgatacacccatcagcaac
cccatgtccgtgtacgaggagtatcgtactagccgtacttcgtggggaattggagctctt
ggatcggtgattgtagaggttgagttgaacgacgaagcgaagactgtgggtgtgggcatc
tctattggaggagaggctgcctgcttcatggtcgagaatcacttgtctcggtttgtggaa
gggcaggatcctaccaacgtggaactgatctgggatcaaatgtaccgttctaccttgaac
tatggaaggaaggggattgctattcaagctatctcggctgtggatcttgctatctgggac
gctctggggaagttgaaaggagtgccagtgtacgagttgcttggtggaaagaccaaggaa
aagatgccttgctacgctacgacgagccgtcctgatctggcaaaggagatggggttttgg
ggagcaaagttcccgttgccttatggacctgcgaacggggagtggggaatgagagaaaac
attgccaccgtcaggaagtggcgagaggcagttggagaagactttccaataatgatagat
tgttatatgtccctcacacttccttacgcaattgaattcgcacgaaaatgtgaaccctac
aacgtaaagtggattgaggagactttgcctcctgatgactacgaagggtactctgagttg
aagaaggcagtgaaaactacgttgatcacaacaggagagcatgaatacactcgatacggt
tttaggcagttgcttgagaggaagtgtgccgatgtactacaaccagatatcacttggtgt
ggaggtatgacggaggcacgtcgtattgtagcacttgcgtctgcttatgacatccccgtc
atcccgcatggatcaagcatttactcctatcacttgcaaatatgctttccaagttgtccg
atggctgagttccttgtgatgtctccaaaggcagactctatcgtctctttcttcggaaac
ctctttacagacgaaccactcccccaaaatggttacgtagagttgcctcatgacaagcca
ggctttggagtcacactgaatcgggatggcttgaatatgaaaagaccgtatccacgaggc
gtttag
DBGET
integrated database retrieval system
