Thalassiosira pseudonana: THAPSDRAFT_33000
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Entry
THAPSDRAFT_33000 CDS
T01078
Name
(RefSeq) formate-tetrahydrofolate ligase
KO
K01938
formate--tetrahydrofolate ligase [EC:
6.3.4.3
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00670
One carbon pool by folate
tps01100
Metabolic pathways
tps01200
Carbon metabolism
tps01240
Biosynthesis of cofactors
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
THAPSDRAFT_33000
Enzymes [BR:
tps01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.4 Other carbon-nitrogen ligases
6.3.4.3 formate---tetrahydrofolate ligase
THAPSDRAFT_33000
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Motif
Pfam:
FTHFS
Motif
Other DBs
NCBI-GeneID:
7451268
NCBI-ProteinID:
XP_002288410
JGI:
33000
UniProt:
B8BY90
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Position
3:1340608..1342653
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AA seq
653 aa
AA seq
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MATSHPKLQPKTPVPSDIEVSQDIVREVGLLPIQDVAKEAGLLESEVIPWGIAKAKVQLN
STLNRLSDAPDGNYIVCTGINPTPLGEGKSTTTIGLAQALGAILGKKAFACIRQPSQGPT
FGIKGGAAGGGYAQVVPMEEFNLHLTGDIHAITAANNLLAAAIDTRMFHEDSQSDEALYK
RLCLANGKPFPPIMKKRLVKLGIDPNKGPADLTAEERSKFARLDFDKSTITWQRVLDTCD
RHLRKVTVGVGPNETIQPRGTVKGETPREQHSRDTGFDITVASEIMAVLALAKDLPDLRD
KLGNMVVGYSKAGEPITADDLGCGGALTVLMKDALLPTLMQTVERTPVLVHAGPFANIAI
GNSSIVADRLALKLAGEDGYVVTEAGFGADIGMEKFFNIKCRESGLKPKCAVIVATVRAL
KMHGGGPPVSAGKPLAKEYTEENIPLVAAGCANLVKHIQNARKFGVEAVVAINQFKSDTP
GEMEAIRQASLNAGAFDAVVSNHWAEGGKGAENLAKAVVSACEKSKSENFKFLYDLNLPI
RDKVEAISKEIYGADGVDFSELAEQQMKQYESSGFGNLPICIAKTQYSFSCDASAKGVPT
GFRIFVREIRSCIGAGFLYPICGDIQTIPGLPTRPGFYDVDIDVKTGQVIGLF
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcccacccaaagctacaaccgaagacgccggtgccaagcgatatcgaggta
tctcaagatatcgtccgtgaagtaggactgctgcctattcaagatgtagcgaaggaagca
ggtctccttgagtccgaagtaattccatggggaattgcaaaagccaaggttcaattgaac
tcaacgctcaatcgtctcagtgatgctcctgacggcaactacatcgtgtgcacgggcatc
aatcctactcctcttggggaaggaaagtctactactaccattggcctcgctcaggcgttg
ggtgcaatactcgggaagaaggcgttcgcatgcattcgtcagccaagtcagggaccaacc
tttggtatcaagggaggagccgccggtggaggatatgcacaagttgtgcctatggaagaa
ttcaatctacacttgactggagacattcatgccatcactgcagcaaacaacttgttggca
gcggctattgatacgcgtatgtttcacgaggattctcaatcggacgaagcactctacaaa
cgactgtgcttggcaaatggcaaacccttcccaccaatcatgaaaaagcgattggtaaag
ttgggtattgatccaaacaaaggtccggcggacttgactgctgaggaacgatccaagttt
gctcgtcttgactttgacaagtctaccatcacgtggcaacgagtacttgacacatgtgat
aggcatttgcgtaaggttacggttggagttggacctaatgaaactattcaacctcgtggt
actgtcaagggagagacacctcgtgaacaacactctcgtgatactggttttgatatcacc
gtggcgagtgagatcatggctgttttggctttggccaaagacttgcccgatttgcgtgac
aaacttggaaacatggtagtaggatactccaaggcaggagaacccatcactgcggatgat
ttgggatgtggaggtgcattgacggtgttgatgaaggatgctttgttacccactttgatg
caaactgtggagcgtactccagtgttggttcatgcaggcccattcgctaacattgccatc
ggcaactcgagtatcgttgcggatagattggcattgaaattggctggagaagatggatat
gtcgtaactgaggcgggatttggggctgacattgggatggaaaaattcttcaatattaaa
tgccgtgaatcaggcctcaaaccaaagtgtgcagtaattgtagctaccgttcgtgctctc
aaaatgcacggtggtggccctcctgtctctgcaggcaaaccacttgccaaagagtacact
gaggagaacattccattggtggcagcaggatgtgctaatctcgtcaaacatattcagaat
gcaaggaagtttggagtggaggcagtagttgcaatcaatcaattcaaatcagacactccc
ggagagatggaggcaattcgacaggctagtttaaatgctggagcatttgatgcagtagtt
tctaaccactgggcggagggaggtaaaggagcagagaatcttgcaaaggcggtagtatct
gcatgtgagaagagcaaaagcgagaacttcaagtttttgtatgatttgaatctaccaatt
cgcgataaggttgaggcaatcagtaaggagatttacggtgcagacggagtggacttctcc
gagttggccgagcagcaaatgaaacagtacgaaagcagcgggttcggcaacctaccgatt
tgtattgcaaagactcaatactccttcagttgcgatgccagtgccaaaggtgtgccaact
ggctttcgcatctttgtgagggagatccgtagttgtatcggcgctggtttcctctaccca
atttgcggtgacatccagacaattccaggtctaccaactcgtcccggattttacgacgta
gacattgacgtcaagactggacaggtcattgggttgttttag
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