Thalassiosira pseudonana: THAPSDRAFT_33072
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Entry
THAPSDRAFT_33072 CDS
T01078
Name
(RefSeq) sec1-family transport protein
KO
K19998
sec1 family domain-containing protein 1
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_33072
Membrane trafficking [BR:
tps04131
]
SNARE
SNARE associated proteins
Syntaxin-binding proteins
THAPSDRAFT_33072
Endoplasmic reticulum (ER) - Golgi transport
Others
Others
THAPSDRAFT_33072
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sec1
SeleniumBinding
Motif
Other DBs
NCBI-GeneID:
7451313
NCBI-ProteinID:
XP_002288458
JGI:
33072
UniProt:
B8BYI3
LinkDB
All DBs
Position
3:<1584088..>1586119
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AA seq
603 aa
AA seq
DB search
PTTTANSSSSPWKLLIYDTHCRSIISPLLSVSRLRSLGVTLHLLLPSDREPIPDVPAVYF
VQPTRENLAIVARDCSRNLYQCAHLHFSSRIERPIMEDFARLVVNTGGLQQVASVHDQFV
DFCCHEENLFTLNVKESYVVYNNPGAGESEMEGAMERIAGGLFSVVVTLGCVPVIRCPRG
GAPEMVARKLNKLITQHPTLLRSKGHQTSHHRPVLVIMDRNMDLITPIQHASTYQALIDD
VLDHHANRVEFNVKPEGGEDANNRRRGRAPPPVRKKLDIDPDTDPFYSRHKFNPFPEAIE
SNGTELQDVTRREQQIRSKTSGSEDAAAAAAAAGGSSDLATAVESLPILLERKKKLEVHT
SILQAVMNEVAARDVPQFYELEASLATGTYKNDSSKAKKDVMELVTDPTKGNVDDKVRLV
IVYVLSAAGKSADIDEVAQAMKESLEMKGSTVNGGAAITEGSNATLGAGSAGSDMLSSFM
ARATNQATGLLAKATDRLGTMLGKIHKHRATLVVENICEMRPNTEDDDYLYLDPRVKGDV
DVMSLRNATRAPVREAIAFMIGGGCYGEYQNLQMVANERRNVTYGSTEIVDPSTFLSHLG
KLV
NT seq
1812 nt
NT seq
+upstream
nt +downstream
nt
cccacgacaaccgccaactcttcctcctcgccatggaaactcctaatctacgacactcac
tgccgctccataatctcccctctcctctcagtatctcgcctccgctcactaggcgtgaca
ctacaccttctcctcccctccgatcgagagcccatccccgacgtgccggccgtgtacttc
gtccaacccacccgagagaacttggccatcgttgcacgagactgttccaggaatttgtat
caatgtgctcatctccacttcagttcgaggattgaacgccccattatggaagattttgca
cgtcttgtggtgaatacggggggactgcaacaggtggcatcggttcatgatcagtttgtt
gacttttgctgtcatgaggagaatttgtttactttgaatgtgaaggagagttatgttgtt
tataataatccgggggctggggagagtgagatggagggggcgatggagaggattgcgggg
gggttgtttagtgttgtggttacgttgggttgcgttcctgtgattcgttgtccgagggga
ggagcacccgaaatggtggcacgcaaactgaacaaactaatcactcaacacccaaccctc
ctccgatccaaaggtcaccaaacatcacaccatcgacccgttctcgtaatcatggatcgt
aacatggacttaatcacaccaatccaacatgcatcaacataccaagcactcatcgacgac
gtattagatcatcatgcgaaccgtgtagaattcaatgtcaaaccagaaggaggagaagac
gccaacaacagacgaaggggacgggcgccaccaccagttagaaaaaagttggatattgac
ccagacactgacccgttttacagcaggcataagttcaacccgtttccggaggcgattgag
agcaatggtacggagttgcaggatgtgacgagacgcgagcagcagattcggtcaaagact
tctggaagtgaggatgcagcggctgctgcggcagctgcaggaggttcttctgatttggca
actgcggtagaatctttgccgatattgctggaacgaaagaagaagttggaggttcataca
tccatcttgcaggctgttatgaacgaggtggctgctagggacgtacctcaattttacgag
ttggaagcatcattggcgacaggaacgtacaaaaatgattcttccaaggcgaagaaggat
gtgatggagttggttactgatccgacaaagggcaatgtggatgataaagtgcgtttggtg
attgtgtacgtcttgtccgctgcggggaagagtgcagatattgatgaggtggcacaggca
atgaaggaatcactggagatgaaagggtcaacagttaacggtggggctgcaattaccgag
ggaagcaatgccactctcggtgccggctccgccggatcagacatgctttccagtttcatg
gcacgtgccaccaaccaagccaccggtctactagcgaaggcaaccgatcgtctcggaacg
atgttgggcaagattcacaaacatcgggcaacacttgtcgtggagaacatttgtgaaatg
agacccaacaccgaagacgacgactatctgtatctcgatccacgtgtcaagggtgatgta
gacgtgatgtcattacggaatgcaacgcgggctcctgttcgagaggcaattgcattcatg
attggagggggctgttatggagagtatcagaatttgcaaatggtggcgaatgagaggagg
aatgtgacgtatgggagtacggagattgtggatccgagtactttcttgagtcatttgggc
aagttggtgtag
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