Entry |
|
Name |
(RefSeq) syntaxin, epimorphin family
|
KO |
|
Organism |
tps Thalassiosira pseudonana
|
Pathway |
tps04130 | SNARE interactions in vesicular transport |
|
Brite |
KEGG Orthology (KO) [BR:tps00001]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04130 SNARE interactions in vesicular transport
THAPSDRAFT_33228
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:tps04131]
THAPSDRAFT_33228
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:tps04147]
THAPSDRAFT_33228
Membrane trafficking [BR:tps04131]
SNARE
Syntaxin (Qa)
Stx-PM
THAPSDRAFT_33228
Exosome [BR:tps04147]
Exosomal proteins
Exosomal proteins of epithelial cells
THAPSDRAFT_33228
Exosomal proteins of other body fluids (saliva and urine)
THAPSDRAFT_33228
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3:11396..12193
|
AA seq |
265 aa
MKQFFNDVEAIKLDISTVTSATEQITSLKDKAVLATSETEESQISDTIRTLVESTNKRAK
TCKNLLGLLKQENANLKEKKEITATDLRVRENLVNTLLRKFIDEMKRYQNSQQQYKTDVK
KKVTRQVQMIKPDATDQEVDDIMRSEGGREALYQQQILSGGVNDQIKTQYRQVAGKYQDV
LTLEASVAELHQMFLDFALLTEQQGELLDQIEYQVRSAADYVEDANVDVYEAIEYQKKIR
KKQCWILLIVVVVIIVVLFSSGIIP |
NT seq |
798 nt +upstreamnt +downstreamnt
atgaagcaattcttcaacgacgtcgaggccatcaagctggacatctccacggtcacctcc
gcaacggaacaaatcacctcgctcaaagacaaggcagtcctcgccacatccgaaacggaa
gagtcgcaaatcagtgataccattcgtactctcgtggagtctactaacaagcgggccaag
acgtgtaaaaatctgctggggctgttgaagcaggagaatgccaatctcaaggagaagaag
gagattaccgccactgatttgagggtgagagagaacttggtcaacactcttctaagaaag
tttattgatgagatgaaacgatatcagaattcacaacagcaatacaaaactgatgttaag
aagaaggtcactcgtcaagtgcaaatgattaaaccggatgctaccgatcaagaagtggat
gacattatgaggagtgaggggggacgagaggcgttgtatcaacagcagattctaagcggg
ggagtcaacgatcagatcaagacgcaataccgacaagtggcggggaagtatcaagatgtc
ttgacgttagaagcaagtgtggcagagttgcatcaaatgtttttagattttgcattgttg
acggagcagcagggggagttgctcgatcagattgaataccaagtgagatcggcggcggat
tatgtggaggatgcgaatgtggatgtgtatgaggcgattgagtatcaaaagaagattagg
aagaagcagtgttggatattgttgattgtggtagtggttatcattgtcgttttgttctcg
tcggggattattccgtag |