KEGG   Thalassiosira pseudonana: THAPSDRAFT_33228
Entry
THAPSDRAFT_33228  CDS       T01078                                 
Name
(RefSeq) syntaxin, epimorphin family
  KO
K08486  syntaxin 1B/2/3
Organism
tps  Thalassiosira pseudonana
Pathway
tps04130  SNARE interactions in vesicular transport
Brite
KEGG Orthology (KO) [BR:tps00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    THAPSDRAFT_33228
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:tps04131]
    THAPSDRAFT_33228
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:tps04147]
    THAPSDRAFT_33228
Membrane trafficking [BR:tps04131]
 SNARE
  Syntaxin (Qa)
   Stx-PM
    THAPSDRAFT_33228
Exosome [BR:tps04147]
 Exosomal proteins
  Exosomal proteins of epithelial cells
   THAPSDRAFT_33228
  Exosomal proteins of other body fluids (saliva and urine)
   THAPSDRAFT_33228
SSDB
Motif
Pfam: Syntaxin SNARE Csm2_III-A Pepsin-I3 Plk4_PB2 Syntaxin_2
Other DBs
NCBI-GeneID: 7452782
NCBI-ProteinID: XP_002288135
JGI: 33228
UniProt: B8BWQ6
LinkDB
Position
3:11396..12193
AA seq 265 aa
MKQFFNDVEAIKLDISTVTSATEQITSLKDKAVLATSETEESQISDTIRTLVESTNKRAK
TCKNLLGLLKQENANLKEKKEITATDLRVRENLVNTLLRKFIDEMKRYQNSQQQYKTDVK
KKVTRQVQMIKPDATDQEVDDIMRSEGGREALYQQQILSGGVNDQIKTQYRQVAGKYQDV
LTLEASVAELHQMFLDFALLTEQQGELLDQIEYQVRSAADYVEDANVDVYEAIEYQKKIR
KKQCWILLIVVVVIIVVLFSSGIIP
NT seq 798 nt   +upstreamnt  +downstreamnt
atgaagcaattcttcaacgacgtcgaggccatcaagctggacatctccacggtcacctcc
gcaacggaacaaatcacctcgctcaaagacaaggcagtcctcgccacatccgaaacggaa
gagtcgcaaatcagtgataccattcgtactctcgtggagtctactaacaagcgggccaag
acgtgtaaaaatctgctggggctgttgaagcaggagaatgccaatctcaaggagaagaag
gagattaccgccactgatttgagggtgagagagaacttggtcaacactcttctaagaaag
tttattgatgagatgaaacgatatcagaattcacaacagcaatacaaaactgatgttaag
aagaaggtcactcgtcaagtgcaaatgattaaaccggatgctaccgatcaagaagtggat
gacattatgaggagtgaggggggacgagaggcgttgtatcaacagcagattctaagcggg
ggagtcaacgatcagatcaagacgcaataccgacaagtggcggggaagtatcaagatgtc
ttgacgttagaagcaagtgtggcagagttgcatcaaatgtttttagattttgcattgttg
acggagcagcagggggagttgctcgatcagattgaataccaagtgagatcggcggcggat
tatgtggaggatgcgaatgtggatgtgtatgaggcgattgagtatcaaaagaagattagg
aagaagcagtgttggatattgttgattgtggtagtggttatcattgtcgttttgttctcg
tcggggattattccgtag

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