Thalassiosira pseudonana: THAPSDRAFT_33316
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Entry
THAPSDRAFT_33316 CDS
T01078
Symbol
DGD1
Name
(RefSeq) dtdp-glucose 4,6-dehydratase
KO
K08678
UDP-glucuronate decarboxylase [EC:
4.1.1.35
]
Organism
tps
Thalassiosira pseudonana
Pathway
tps00520
Amino sugar and nucleotide sugar metabolism
tps01100
Metabolic pathways
tps01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00520 Amino sugar and nucleotide sugar metabolism
THAPSDRAFT_33316 (DGD1)
Enzymes [BR:
tps01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.35 UDP-glucuronate decarboxylase
THAPSDRAFT_33316 (DGD1)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
NAD_binding_4
3Beta_HSD
Polysacc_synt_2
RmlD_sub_bind
adh_short
NmrA
TrkA_N
KR
Motif
Other DBs
NCBI-GeneID:
7446752
NCBI-ProteinID:
XP_002289621
JGI:
33316
UniProt:
B8C113
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Position
4:complement(273127..274373)
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AA seq
314 aa
AA seq
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MKTPSLPDGKRKKILVTGGAGFVGSHLVDKLMMEGHEVIVIDNFFTGQRKNIEHWMHHPR
FSLVVHDVTEPIMLEVDEIYHLACPASPPHYQYNPVKTIKTSTMGTINMLGLAKRVKAKI
LLTSTSEIYGDPKVHPQPESYWGNVNTIGPRSCYDEGKRVAETMMYSYRNQNNVDVRVAR
IFNTFGPRMHPNDGRVVSNFIIQSLQDKPLTIYGDGSQTRSFQYVSDLVDGLHALMNGGY
DLPVNLGNPDEYTVKHFAEYIKEITGSASDISFLKATQDDPTQRKPDITTAKRELNWEPK
VTVKEGLQKTIQYF
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
atgaagactcctagtttgccggatgggaagaggaagaagattttggttacgggtggtgct
ggatttgttggatcccatctagtcgacaaactaatgatggaaggccatgaggtaatcgta
atcgacaacttcttcaccggacaacgcaagaacattgaacattggatgcatcatcctcgt
ttcagcctcgtagtccacgatgtgactgaaccaatcatgttggaagtggatgagatttat
cacttggcttgtccagctagtcctcctcattatcagtacaatcctgtcaagactatcaag
actagtactatgggaactattaatatgttgggattggcaaagagggtgaaggccaagatt
ttgttgacttctacttctgagatctacggagaccccaaagttcatcctcaacctgagtct
tattggggtaatgtgaacactattggacctcgctcatgttacgacgaggggaaacgtgtt
gctgaaacaatgatgtattcctaccgcaatcaaaacaacgttgacgttcgcgtcgctcgt
atcttcaacacctttggaccgcgaatgcatcctaatgatggtagggttgtttccaacttc
atcattcaatccttgcaagacaagccattgacaatctacggtgacggaagtcagacgagg
agctttcaatacgtgtcggatttagtggatggattgcatgcattgatgaacggaggatat
gatttgccagtgaatctcggcaatcccgatgagtatacggtgaagcactttgcagagtac
atcaaagaaatcacggggagtgcatctgatatttcattcctgaaagctactcaagatgat
cctacgcaacgtaagccagacattaccacagcaaagcgtgagttgaattgggagccaaag
gtgacggtgaaggagggattgcaaaagactattcaatacttt
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