Thalassiosira pseudonana: THAPSDRAFT_33600
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Entry
THAPSDRAFT_33600 CDS
T01078
Name
(RefSeq) EF hand-containing protein
KO
K02183
calmodulin
Organism
tps
Thalassiosira pseudonana
Pathway
tps04070
Phosphatidylinositol signaling system
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09130 Environmental Information Processing
09132 Signal transduction
04070 Phosphatidylinositol signaling system
THAPSDRAFT_33600
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
tps01009
]
THAPSDRAFT_33600
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
tps04131
]
THAPSDRAFT_33600
03036 Chromosome and associated proteins [BR:
tps03036
]
THAPSDRAFT_33600
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
tps04147
]
THAPSDRAFT_33600
Protein phosphatases and associated proteins [BR:
tps01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Calcineurin (PPP3/ PP2B)
Regulatory subunits
THAPSDRAFT_33600
Membrane trafficking [BR:
tps04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
THAPSDRAFT_33600
Chromosome and associated proteins [BR:
tps03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Centriole replication proteins
THAPSDRAFT_33600
Exosome [BR:
tps04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
THAPSDRAFT_33600
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EF-hand_1
EF-hand_7
EF-hand_6
EF-hand_5
EF-hand_9
EF-hand_8
AIF-1
DUF7375
UPF0154
Motif
Other DBs
NCBI-GeneID:
7443777
NCBI-ProteinID:
XP_002289492
JGI:
33600
UniProt:
B8C0A4
LinkDB
All DBs
Position
4:1914792..1915307
Genome browser
AA seq
149 aa
AA seq
DB search
MVLSQEDIDGCREAFLAFDKDRSGTIDVWELRQVLEAMGQAPTEDELFQMISEVDENMSG
SIDFGEFLKVVESHKKRAENLDDENDLLDAFVACGGQPDKGGHVKRETLISIIKHDFGLT
IDIEDLINKIDTDGSGEIEFDEFSLMLGK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
atggtcctaagtcaagaagacatcgacggttgcagagaagccttcttggcctttgataag
gatagatccggaactattgacgtgtgggagcttcggcaagtattggaagcaatgggacag
gctccaaccgaagatgagttgttccagatgattagcgaagtggacgagaacatgagtgga
tccatcgactttggagaattcctcaaagttgtggagagtcataagaaacgtgccgagaat
ctagacgacgaaaatgatctcttagatgcttttgtcgcatgcgggggtcagccagacaaa
ggtgggcatgtcaagcgagagacgctaatctccataatcaagcatgactttggtttaacc
attgatattgaggacttgatcaacaaaattgatacggatggatcaggagaaattgaattt
gatgagttttcgctaatgttgggaaagtga
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