Thalassiosira pseudonana: THAPSDRAFT_33725
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Entry
THAPSDRAFT_33725 CDS
T01078
Symbol
RPN11
Name
(RefSeq) 26S proteasome regulatory subunit
KO
K03030
26S proteasome regulatory subunit N11
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_33725 (RPN11)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
tps01002
]
THAPSDRAFT_33725 (RPN11)
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
tps04121
]
THAPSDRAFT_33725 (RPN11)
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_33725 (RPN11)
Peptidases and inhibitors [BR:
tps01002
]
Metallo peptidases
Family M67
THAPSDRAFT_33725 (RPN11)
Ubiquitin system [BR:
tps04121
]
Deubiquitinating enzyme (DUB)
Ubiquitin-specific proteases (UBPs)
JAMM
THAPSDRAFT_33725 (RPN11)
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
THAPSDRAFT_33725 (RPN11)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
JAB
RPN11_C
Prok-JAB
DUF5624
TetR_C_5
NUC
UPF0172
Motif
Other DBs
NCBI-GeneID:
7452205
NCBI-ProteinID:
XP_002289504
JGI:
33725
UniProt:
B8C0D0
LinkDB
All DBs
Position
4:1980619..1981551
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AA seq
310 aa
AA seq
DB search
MDRIQQLMRGMPGGGMGGAPTDSPTPDCAEKVHVSSLALLKMLKHGRAGVPMEVMGLMLG
QFVDDYTINCVDVFAMPQSGTSVSVEAVDPVFQTKMLDMLQQTGRGEMVVGWYHSHPGFG
CWLSSTDINTQSSFEALNARAVALVVDPIQSVKGKVVIDCFRLINPQLMMMGQEPRQTTS
NIGHLNKPSIQALIHGLNRHYYSIVIDYRKNELEEQMLMNLHKRNWTNGLTVDRFETHQE
KNESIVDKMLKLTEDYNERIVQEEGKTSEEVMVENVGKVDPKKHLEGCVADLMSANIIQC
LGTMLDTVIF
NT seq
933 nt
NT seq
+upstream
nt +downstream
nt
atggacagaatccaacaactgatgcgaggaatgcccggaggaggcatgggcggcgcaccc
accgactcccccacacccgactgcgccgaaaaagtccacgtctcctccctcgccctcctc
aaaatgctcaaacacggccgcgccggggttcccatggaagtcatgggcctcatgctcggg
caattcgtcgacgattacaccattaattgcgtggatgtattcgccatgcctcagagtgga
acttcggttagtgtggaggcagtggatccggtgtttcagacgaaaatgttggatatgttg
cagcagacgggacggggggagatggtggtgggttggtatcattcccatcctggattcgga
tgttggttgtcttcgacggatatcaatactcagagttcgtttgaggcgttgaatgcccgt
gctgtggccttagtggtggatcctattcaatctgtcaaggggaaagtggtcattgattgc
ttccgtctcatcaatcctcagctaatgatgatgggacaagagccgcgacagaccacatcc
aacattggacatctcaacaaaccatccatccaagctctcatccacggtctcaacagacat
tactactccatcgtcattgactaccgtaagaacgaactcgaggaacaaatgctcatgaac
ctccacaaacgaaattggaccaacggtctcaccgtggaccgattcgaaacccaccaggag
aagaatgaaagtatcgtagacaaaatgttgaagttgacggaagattacaatgagagaatt
gtgcaagaggagggaaagacgagtgaggaggtcatggtggagaatgtggggaaggttgat
ccgaagaaacatttggaggggtgtgtggctgatttgatgagtgctaatattattcagtgt
ttggggactatgttggatactgtcatcttttga
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