Thalassiosira pseudonana: THAPSDRAFT_34018
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Entry
THAPSDRAFT_34018 CDS
T01078
Name
(RefSeq) predicted protein
KO
K03037
26S proteasome regulatory subunit N7
Organism
tps
Thalassiosira pseudonana
Pathway
tps03050
Proteasome
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03050 Proteasome
THAPSDRAFT_34018
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
tps03051
]
THAPSDRAFT_34018
Proteasome [BR:
tps03051
]
Eukaryotic proteasome
Regulatory particles
PA700 (19S proteasome)
non-ATPase subunits
THAPSDRAFT_34018
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPN7
PCI
RPN7_PSMD6_C
Motif
Other DBs
NCBI-GeneID:
7451751
NCBI-ProteinID:
XP_002290109
JGI:
34018
UniProt:
B8C216
LinkDB
All DBs
Position
5:421219..422157
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AA seq
312 aa
AA seq
DB search
ASLATLSTLVTNATEEAGDMEVLQAKMDIARYAAKSCTKEEALKAYEEVVALPKLSTGKK
MDAFLEMARVASFWGDWKVMRETLDKASKAIAKGGDWDRRNRLKAYQAISHILVRDMESA
SKLLVDGIATFSCGELCEYSEFITYAVVTSLLYLPRTELKKSIIDGSEILQVAKEIPVVI
RLANTLYDCDYTQYLHTIVALQPHLIANRYLQPHAGYLLREFHVLGFKQFLDSYQSVTLE
SMASSFGVGTEFLDVQLSRFIAAGRLTAKIDKFGGVVETNRPDEKNARYRDMIQKGDLLL
NRIQKLGRVVDL
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
gcctccctcgcaaccctttcgactctcgttaccaacgccaccgaagaagcgggtgatatg
gaagttctacaggcgaagatggatatagcacgatatgcagccaaaagttgtacgaaggag
gaggcattgaaggcgtatgaggaggtggtggctttgcccaagttgagcacggggaagaag
atggatgcgtttttggaaatggctagggtggctagtttttggggagattggaaggttatg
agagagactttggacaaggcatccaaagctatcgccaaaggaggcgactgggatcgtcgc
aaccgtctcaaggcctaccaggccatctcccacattcttgtccgtgacatggaatcggcc
tctaaactcctcgttgacggaattgccaccttctcttgtggagagctatgtgaatactcg
gagttcatcacctatgcggttgttaccagcttgttgtatttgccaagaacggaattgaaa
aagagcatcattgatggaagtgagattttgcaggttgccaaagagattcctgtggtgata
cgacttgcgaatacgttgtatgattgtgactacacacaatatcttcatacgattgtggct
cttcagccccatctcattgcgaatcgatacctccagcctcatgcgggttatcttcttcgt
gagttccacgtcttgggtttcaaacagttcctcgactcgtatcaatccgtgacacttgag
agtatggcctcgtcatttggtgtgggaacggagttcttggatgtgcagctcagtcggttt
attgctgcggggaggctgacggccaagattgacaagttcggaggagtggtcgagacgaac
aggccggatgagaagaatgctaggtacagggatatgattcagaagggtgatttgttgttg
aatcgtattcagaagttgggtagggtggttgatttgtaa
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