Thalassiosira pseudonana: THAPSDRAFT_34412
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Entry
THAPSDRAFT_34412 CDS
T01078
Name
(RefSeq) predicted protein
KO
K06947
polynucleotide 5'-hydroxyl-kinase GRC3/NOL9 [EC:2.7.1.-]
Organism
tps
Thalassiosira pseudonana
Brite
KEGG Orthology (KO) [BR:
tps00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
tps03009
]
THAPSDRAFT_34412
Ribosome biogenesis [BR:
tps03009
]
Eukaryotic type
Pre-60S particles
Kinases
THAPSDRAFT_34412
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CLP1_P
AAA_22
AAA_16
FtsK_SpoIIIE
RNA_helicase
AAA_14
AAA_18
ABC_tran
DUF815
NTPase_1
ORC-CDC6-like
Motif
Other DBs
NCBI-GeneID:
7448145
NCBI-ProteinID:
XP_002290763
JGI:
34412
UniProt:
B8C379
LinkDB
All DBs
Position
5:complement(1482046..1482525)
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AA seq
141 aa
AA seq
DB search
LICGAKGVGKSTCLRYVTNRLLSTQLTIKCKRQVAILDVDCGQSELSPPGMMTLTILSRP
LLSDPPLHMVLASYFYGDITSKADPDTFINMTTQLMRTYAKLVAGSSTACPLVVNTDGWV
KGLGAEILAAVIGATNPCHVV
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
ttgatatgtggcgccaagggtgttgggaagtctacgtgccttcgatatgtcacaaatcgt
cttctctccacacaactgacaatcaaatgcaaacgtcaagtcgccatattggatgtagac
tgtggccaatctgaactaagccctccaggaatgatgacactaacaattctatcacgtcct
ctcttatcggatcctccgttgcatatggttttggcatcatacttttacggcgatattact
tcaaaagctgacccagacacattcattaacatgacaactcagctgatgcgaacgtatgcc
aaactggtcgctgggagctctactgcttgtcctttagttgtgaatacggatggctgggtg
aaaggccttggcgctgagatcttggctgcggtcatcggtgccacaaacccttgtcacgtt
gtt
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